Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 VIT-203ENST00000389975 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ADD3-203ENST00000360162 3114 ntAPPRIS ALT1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 LAMB4-203ENST00000418464 2600 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC022819.1-201ENST00000563495 3910 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AHCYP5-201ENST00000331585 1238 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-120P-201ENST00000363009 157 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP145-201ENST00000363124 125 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNA5SP69-201ENST00000364477 117 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORD87-201ENST00000364849 89 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-117P-201ENST00000365415 107 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 Y_RNA.351-201ENST00000365436 96 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-28P-201ENST00000383861 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-132P-201ENST00000383863 107 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-27P-201ENST00000383869 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-1-201ENST00000383925 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNVU1-18-201ENST00000384010 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-2-201ENST00000384278 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-4-201ENST00000384659 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU1-3-201ENST00000384782 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 STAG3L1-201ENST00000404291 496 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 PPIAP31-201ENST00000405422 495 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 U3.33-201ENST00000408117 204 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 SNORA11.1-201ENST00000408133 129 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SKP61-201ENST00000410642 295 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL049758.1-201ENST00000423154 397 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC126124.1-201ENST00000426104 185 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL451062.2-201ENST00000427515 271 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 KRTAP9-11P-201ENST00000431013 525 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ACTP1-201ENST00000440793 383 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL451050.1-201ENST00000450126 415 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL508P-201ENST00000464472 303 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL74P-201ENST00000464966 299 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL757P-201ENST00000466709 301 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RPL34P22-201ENST00000468193 318 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC006517.1-201ENST00000480485 328 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL505P-201ENST00000482644 293 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RNU6-419P-201ENST00000517030 63 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 SOD1P3-201ENST00000518682 454 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC007536.1-201ENST00000533382 349 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR4685-201ENST00000578185 69 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL786P-201ENST00000579130 298 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL311P-201ENST00000579858 306 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR4682-201ENST00000580643 80 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC026150.3-201ENST00000602595 499 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL357312.1-201ENST00000603879 298 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC090525.3-201ENST00000605601 189 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL715P-201ENST00000606972 286 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 RN7SL760P-201ENST00000607344 270 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 U1.40-201ENST00000610976 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 U6.81-201ENST00000612550 106 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR6872-201ENST00000612981 62 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AL359075.3-201ENST00000613288 217 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 U1.27-201ENST00000615842 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 MIR6505-201ENST00000617206 71 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.5□□□□□ -2.17
KRTAP4-4Q9BYR3 AC021613.1-201ENST00000623880 111 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms