Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC124916.2-201ENST00000604416 224 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 MIR6778-201ENST00000617912 73 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC006001.4-201ENST00000622243 395 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USB1Q9BQ65 OR4G2P-202ENST00000641004 1759 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 AL137141.1-201ENST00000624622 4836 ntBASIC5.51□□□□□ -1.53
USB1Q9BQ65 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
USB1Q9BQ65 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
USB1Q9BQ65 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 RN7SKP78-201ENST00000364711 318 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 RNU6-1175P-201ENST00000365200 107 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 RNU6-20P-201ENST00000384106 107 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 MIR153-2-201ENST00000385225 87 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 RNA5SP213-201ENST00000391031 106 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 RNA5SP115-201ENST00000411160 107 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 RN7SKP49-201ENST00000516675 260 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 RNU6-567P-201ENST00000516746 107 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 MIR4310-201ENST00000582950 57 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 MIR4701-201ENST00000583094 63 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 RPSAP75-201ENST00000605848 301 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 TCL6_3.1-201ENST00000619064 137 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 AC110373.1-201ENST00000505994 3505 ntBASIC5.5□□□□□ -1.53
USB1Q9BQ65 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
USB1Q9BQ65 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
USB1Q9BQ65 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
USB1Q9BQ65 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USB1Q9BQ65 MFSD8-239ENST00000641590 2479 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC092692.1-201ENST00000623625 2595 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC073136.1-201ENST00000449426 2884 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 RNA5SP346-201ENST00000363541 121 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 RNU4-56P-201ENST00000364700 142 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 SNORA51.8-201ENST00000384234 132 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 Y_RNA.571-201ENST00000384753 98 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 GCNT1P4-201ENST00000404096 329 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC091390.3-201ENST00000426478 338 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 PPIAP7-201ENST00000454070 489 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 GEMIN2P1-201ENST00000454246 752 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC068228.1-201ENST00000461723 211 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC104339.1-201ENST00000465478 348 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC010265.1-201ENST00000513509 211 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AL499605.1-201ENST00000604628 403 ntBASIC5.49□□□□□ -1.53
USB1Q9BQ65 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
USB1Q9BQ65 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
USB1Q9BQ65 AC114774.1-201ENST00000507410 1770 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms