Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 SAMMSON-226ENST00000642089 1582 ntBASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
DEPDC4Q8N2C3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 Y_RNA.245-201ENST00000364493 95 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-335P-201ENST00000364563 113 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 HMGN1P20-201ENST00000411849 300 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 MTND4LP30-201ENST00000454092 297 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 RN7SKP210-201ENST00000459176 261 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 TRBVB-201ENST00000477100 408 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 RN7SL184P-201ENST00000488308 297 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC104164.2-201ENST00000496953 495 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-397P-201ENST00000516226 104 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC079905.1-201ENST00000549280 475 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC006077.1-201ENST00000604746 343 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC098479.1-201ENST00000609225 154 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AC008079.2-201ENST00000623543 20396 ntBASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.32□□□□□ -1.56
DEPDC4Q8N2C3 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 RNU6-212P-201ENST00000362642 104 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 RPS12P23-201ENST00000419579 400 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 RPEP5-201ENST00000441137 268 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC105384.2-201ENST00000508433 640 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 RN7SKP238-201ENST00000516483 249 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC008521.2-201ENST00000591021 259 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AL355877.2-201ENST00000603670 358 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AL161629.2-201ENST00000615347 275 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 AC024884.1-201ENST00000620583 399 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 NCAPGP1-201ENST00000505112 1814 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 MTND5P6-201ENST00000422338 1798 ntBASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DEPDC4Q8N2C3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 AP004607.3-201ENST00000530354 3915 ntBASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
DEPDC4Q8N2C3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms