Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC011712.1-201ENST00000588959 234 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 AC121334.2-201ENST00000605387 271 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AL391813.2-201ENST00000609113 322 ntBASIC4.74□□□□□ -1.65
MRE11P49959 FRG1KP-201ENST00000623592 341 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC009161.2-201ENST00000624626 138 ntBASIC4.74□□□□□ -1.65
MRE11P49959 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
MRE11P49959 AC092447.10-201ENST00000620607 1652 ntBASIC4.73□□□□□ -1.65
MRE11P49959 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MRE11P49959 AL157700.1-201ENST00000561973 1432 ntBASIC4.73□□□□□ -1.65
MRE11P49959 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
MRE11P49959 TNPO1P3-201ENST00000436471 2662 ntBASIC4.73□□□□□ -1.65
MRE11P49959 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MRE11P49959 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
MRE11P49959 UBE3AP2-201ENST00000429033 2259 ntBASIC4.73□□□□□ -1.65
MRE11P49959 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MRE11P49959 RNU6-845P-201ENST00000362578 103 ntBASIC4.73□□□□□ -1.65
MRE11P49959 SNORA20.2-201ENST00000383922 131 ntBASIC4.73□□□□□ -1.65
MRE11P49959 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.73□□□□□ -1.65
MRE11P49959 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
MRE11P49959 AL024474.1-201ENST00000404655 591 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC127526.1-201ENST00000417526 366 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AL445584.1-201ENST00000431451 330 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.73□□□□□ -1.65
MRE11P49959 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.73□□□□□ -1.65
MRE11P49959 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.73□□□□□ -1.65
MRE11P49959 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC005726.1-201ENST00000494679 427 ntBASIC4.73□□□□□ -1.65
MRE11P49959 FTH1P24-201ENST00000503502 462 ntBASIC4.73□□□□□ -1.65
MRE11P49959 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.73□□□□□ -1.65
MRE11P49959 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.73□□□□□ -1.65
MRE11P49959 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.73□□□□□ -1.65
MRE11P49959 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.73□□□□□ -1.65
MRE11P49959 AC055876.1-202ENST00000567053 138 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC015917.1-201ENST00000579654 510 ntBASIC4.73□□□□□ -1.65
MRE11P49959 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
MRE11P49959 AC018638.8-201ENST00000588755 281 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC067852.4-201ENST00000590314 478 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AP001429.1-201ENST00000602568 530 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC079587.1-201ENST00000603846 277 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC025449.1-201ENST00000603896 529 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AL442067.2-201ENST00000614033 363 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC024940.5-201ENST00000622889 474 ntBASIC4.73□□□□□ -1.65
MRE11P49959 AC138649.5-201ENST00000637456 137 ntBASIC4.73□□□□□ -1.65
MRE11P49959 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MRE11P49959 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.73□□□□□ -1.65
MRE11P49959 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
MRE11P49959 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.73□□□□□ -1.65
MRE11P49959 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
MRE11P49959 AC006971.1-201ENST00000407916 4486 ntBASIC4.72□□□□□ -1.65
MRE11P49959 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
MRE11P49959 AL161781.1-201ENST00000354277 403 ntBASIC4.72□□□□□ -1.65
MRE11P49959 RNU6-359P-201ENST00000365466 108 ntBASIC4.72□□□□□ -1.65
MRE11P49959 RNU6-1293P-201ENST00000384077 107 ntBASIC4.72□□□□□ -1.65
MRE11P49959 Y_RNA.548-201ENST00000384656 105 ntBASIC4.72□□□□□ -1.65
MRE11P49959 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.72□□□□□ -1.65
MRE11P49959 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.72□□□□□ -1.65
MRE11P49959 AL606489.2-201ENST00000433886 234 ntBASIC4.72□□□□□ -1.65
MRE11P49959 AL049734.2-201ENST00000441066 616 ntBASIC4.72□□□□□ -1.65
MRE11P49959 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.72□□□□□ -1.65
MRE11P49959 AP1S2P1-201ENST00000457344 379 ntBASIC4.72□□□□□ -1.65
MRE11P49959 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.72□□□□□ -1.65
MRE11P49959 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.72□□□□□ -1.65
MRE11P49959 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.72□□□□□ -1.65
MRE11P49959 TXNP6-201ENST00000510190 310 ntBASIC4.72□□□□□ -1.65
MRE11P49959 AC107934.1-201ENST00000522215 217 ntBASIC4.72□□□□□ -1.65
MRE11P49959 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MRE11P49959 AC053481.4-201ENST00000583164 216 ntBASIC4.72□□□□□ -1.65
MRE11P49959 AC116312.1-201ENST00000606841 314 ntBASIC4.72□□□□□ -1.65
MRE11P49959 RNU6-156P-201ENST00000621869 107 ntBASIC4.72□□□□□ -1.65
MRE11P49959 AL158801.5-201ENST00000623123 465 ntBASIC4.72□□□□□ -1.65
MRE11P49959 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.72□□□□□ -1.65
MRE11P49959 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MRE11P49959 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MRE11P49959 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
MRE11P49959 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
MRE11P49959 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.72□□□□□ -1.65
MRE11P49959 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
MRE11P49959 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MRE11P49959 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MRE11P49959 RNU6-1120P-201ENST00000362988 108 ntBASIC4.71□□□□□ -1.66
MRE11P49959 RNA5SP175-201ENST00000364275 119 ntBASIC4.71□□□□□ -1.66
MRE11P49959 SNORD81.2-201ENST00000365153 76 ntBASIC4.71□□□□□ -1.66
MRE11P49959 RNU6-169P-201ENST00000365336 107 ntBASIC4.71□□□□□ -1.66
MRE11P49959 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
MRE11P49959 SNORA69-201ENST00000383895 132 ntBASIC4.71□□□□□ -1.66
MRE11P49959 Y_RNA.500-201ENST00000384466 111 ntBASIC4.71□□□□□ -1.66
MRE11P49959 MIR659-201ENST00000384963 97 ntBASIC4.71□□□□□ -1.66
MRE11P49959 MIR34B-201ENST00000385076 84 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms