Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CLCN1P35523 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.2□□□□□ -1.42
CLCN1P35523 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CLCN1P35523 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLCN1P35523 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
CLCN1P35523 MTND5P9-201ENST00000503854 1755 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 AL137141.1-201ENST00000624622 4836 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 Y_RNA.150-201ENST00000363562 102 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 Y_RNA.180-201ENST00000363867 113 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 RNU6-595P-201ENST00000363944 107 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 RNU6-708P-201ENST00000384217 107 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 Y_RNA.539-201ENST00000384635 107 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 RPL23AP25-201ENST00000430973 463 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 CKS1BP5-201ENST00000434172 273 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 KNOP1P3-201ENST00000446933 426 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 AC022493.1-201ENST00000492984 337 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 RN7SL57P-201ENST00000493687 290 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 RNU6-927P-201ENST00000516199 100 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 Y_RNA.667-201ENST00000516212 107 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 RNU6-1315P-201ENST00000517187 99 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.19□□□□□ -1.42
CLCN1P35523 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN1P35523 AC130289.1-201ENST00000577321 73 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 AC008962.1-201ENST00000605729 304 ntBASIC6.19□□□□□ -1.42
CLCN1P35523 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN1P35523 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CLCN1P35523 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CLCN1P35523 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN1P35523 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN1P35523 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN1P35523 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN1P35523 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
CLCN1P35523 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CLCN1P35523 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN1P35523 Z75746.1-201ENST00000440243 2080 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CLCN1P35523 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN1P35523 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN1P35523 RNU1-150P-201ENST00000362491 162 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN1P35523 MIR301A-201ENST00000385261 86 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN1P35523 RN7SKP16-201ENST00000410180 299 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN1P35523 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.18□□□□□ -1.42
CLCN1P35523 TMEM183AP1-205ENST00000432739 290 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 GAPDHP58-201ENST00000438477 1006 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 AC025458.1-201ENST00000506046 166 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 HMGN1P11-201ENST00000508668 303 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CLCN1P35523 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.18□□□□□ -1.42
CLCN1P35523 AC096996.1-201ENST00000563813 325 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN1P35523 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN1P35523 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN1P35523 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN1P35523 AC073869.8-201ENST00000641806 335 ntBASIC6.18□□□□□ -1.42
CLCN1P35523 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN1P35523 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CLCN1P35523 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.17□□□□□ -1.42
CLCN1P35523 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.17□□□□□ -1.42
CLCN1P35523 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CLCN1P35523 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 AL391987.6-201ENST00000305671 199 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 RNU6-512P-201ENST00000364438 103 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 Y_RNA.237-201ENST00000364439 102 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 RNU2-33P-201ENST00000410344 192 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN1P35523 BX323845.3-201ENST00000428215 527 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 RPS20P1-201ENST00000434853 354 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.17□□□□□ -1.42
CLCN1P35523 RPL29P29-201ENST00000448725 423 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AZGP1P2-201ENST00000454506 345 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 U8.21-201ENST00000459536 136 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 RNU5B-3P-201ENST00000516601 115 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 TRAV37-201ENST00000553906 342 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.17□□□□□ -1.42
CLCN1P35523 MIR1273C-201ENST00000578669 77 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 AC009314.1-201ENST00000603871 304 ntBASIC6.17□□□□□ -1.42
CLCN1P35523 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN1P35523 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN1P35523 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.16□□□□□ -1.42
CLCN1P35523 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN1P35523 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN1P35523 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CLCN1P35523 RNA5SP52-201ENST00000362448 134 ntBASIC6.16□□□□□ -1.42
CLCN1P35523 Y_RNA.54-201ENST00000362766 105 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms