Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.33□□□□□ -1.88
COL5A2P05997 RNU6-678P-201ENST00000516832 109 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 AC105185.1-201ENST00000518705 535 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 IGKV2-36-201ENST00000519999 223 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 AC060788.1-201ENST00000521318 469 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 AL133271.1-201ENST00000538229 291 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.33□□□□□ -1.88
COL5A2P05997 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.33□□□□□ -1.88
COL5A2P05997 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.33□□□□□ -1.88
COL5A2P05997 AC083760.1-201ENST00000589621 670 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.33□□□□□ -1.88
COL5A2P05997 AC078795.2-201ENST00000602835 1252 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 AC055764.2-201ENST00000610089 670 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.33□□□□□ -1.88
COL5A2P05997 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.33□□□□□ -1.88
COL5A2P05997 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.33□□□□□ -1.88
COL5A2P05997 AL021368.2-201ENST00000606125 5352 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 Y_RNA.517-201ENST00000384551 106 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AL583834.1-201ENST00000406943 343 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC069218.2-201ENST00000411665 344 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 MTCO2P34-201ENST00000421994 607 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.32□□□□□ -1.88
COL5A2P05997 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.32□□□□□ -1.88
COL5A2P05997 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.32□□□□□ -1.88
COL5A2P05997 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 HMGB1P25-201ENST00000468402 607 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC072039.1-201ENST00000477611 581 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 GAPDHP39-201ENST00000481866 979 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC011352.3-201ENST00000505162 593 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC093281.2-201ENST00000510153 597 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.32□□□□□ -1.88
COL5A2P05997 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.32□□□□□ -1.88
COL5A2P05997 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.32□□□□□ -1.88
COL5A2P05997 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.32□□□□□ -1.88
COL5A2P05997 AC073648.5-201ENST00000603502 305 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AP003973.1-201ENST00000604639 691 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC018714.1-201ENST00000605028 208 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC069545.1-201ENST00000605671 358 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AL021997.1-201ENST00000605757 193 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC239868.4-201ENST00000608318 671 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 AC092192.1-201ENST00000633154 1018 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL5A2P05997 AC011477.1-204ENST00000623416 1325 ntBASIC3.32□□□□□ -1.88
COL5A2P05997 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL5A2P05997 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL5A2P05997 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL5A2P05997 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.32□□□□□ -1.88
COL5A2P05997 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL5A2P05997 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
COL5A2P05997 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL5A2P05997 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.31□□□□□ -1.88
COL5A2P05997 RN7SKP142-201ENST00000411236 328 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 TPMTP3-201ENST00000411928 735 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 AL137014.1-201ENST00000420490 1226 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.31□□□□□ -1.88
COL5A2P05997 AL590399.6-201ENST00000446396 307 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 OR6C5P-201ENST00000452388 923 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 RPL23AP62-201ENST00000463396 453 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.31□□□□□ -1.88
COL5A2P05997 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.31□□□□□ -1.88
COL5A2P05997 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL5A2P05997 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.31□□□□□ -1.88
COL5A2P05997 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.31□□□□□ -1.88
COL5A2P05997 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 AC010546.1-201ENST00000569391 485 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 AL592221.1-201ENST00000605266 382 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.31□□□□□ -1.88
COL5A2P05997 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.31□□□□□ -1.88
COL5A2P05997 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL5A2P05997 AC093536.2-201ENST00000565257 1406 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 RNF6P1-201ENST00000444889 1784 ntBASIC3.31□□□□□ -1.88
COL5A2P05997 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.31□□□□□ -1.88
COL5A2P05997 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL5A2P05997 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.31□□□□□ -1.88
COL5A2P05997 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL5A2P05997 AL136964.1-201ENST00000622038 2990 ntBASIC3.3□□□□□ -1.88
COL5A2P05997 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL5A2P05997 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.3□□□□□ -1.88
COL5A2P05997 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL5A2P05997 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL5A2P05997 SNORD114-1-201ENST00000362705 72 ntBASIC3.3□□□□□ -1.88
COL5A2P05997 RNU6-931P-201ENST00000363850 107 ntBASIC3.3□□□□□ -1.88
COL5A2P05997 Y_RNA.311-201ENST00000365068 96 ntBASIC3.3□□□□□ -1.88
COL5A2P05997 Y_RNA.359-201ENST00000365498 102 ntBASIC3.3□□□□□ -1.88
COL5A2P05997 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms