Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 DEFB109F-201ENST00000491870 277 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC021146.3-201ENST00000511911 260 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-1038P-201ENST00000516516 104 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-677P-201ENST00000516914 101 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 HMGB1P19-201ENST00000517578 577 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 BTF3P12-201ENST00000519620 469 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC243972.3-201ENST00000539655 198 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 BNIP3P6-201ENST00000549284 499 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 FGF7P1-201ENST00000582820 288 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR4697-201ENST00000582977 78 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR4424-201ENST00000585257 86 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC091135.1-201ENST00000585943 307 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL390240.1-201ENST00000612950 384 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL355810.1-201ENST00000614629 552 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 uc_338.34-201ENST00000617467 174 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC011944.2-201ENST00000624440 683 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC083843.3-201ENST00000623679 2186 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 OR51H2P-202ENST00000641424 3046 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC073544.1-201ENST00000600110 1595 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTND4P35-201ENST00000604257 1375 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 DEFB108F-201ENST00000344638 222 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR514A1-201ENST00000385133 98 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 LAP3P1-201ENST00000403648 294 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU4-46P-201ENST00000410818 138 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-1148P-201ENST00000410992 104 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNA5SP111-201ENST00000411386 101 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC009161.1-201ENST00000417306 376 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL451054.2-201ENST00000420896 202 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 PDSS1P1-201ENST00000422953 1114 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL21P66-201ENST00000426566 466 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 FTH1P6-201ENST00000430768 320 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL7P12-201ENST00000446719 750 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL645939.1-201ENST00000453429 797 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 DHFRP3-201ENST00000455595 559 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SL303P-201ENST00000469773 251 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-685P-201ENST00000517088 95 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC107953.1-201ENST00000522216 297 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTND4P7-201ENST00000523876 130 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RAB11AP2-201ENST00000545905 639 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC007424.1-203ENST00000554613 687 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL121576.1-201ENST00000556055 276 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC022968.1-201ENST00000567372 442 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC006270.2-201ENST00000578523 652 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL7P50-201ENST00000600588 727 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC113403.1-201ENST00000604910 193 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 ARF4P1-201ENST00000605447 541 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC083809.1-201ENST00000615051 472 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005086.4-201ENST00000623065 213 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC112200.1-201ENST00000625015 234 ntBASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.18□□□□□ -1.9
IGHV4-28A0A0C4DH34 MAPK10-349ENST00000641767 3661 ntBASIC3.17□□□□□ -1.9
IGHV4-28A0A0C4DH34 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms