Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC091178.1-203ENST00000584586 279 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 HMGB2P1-201ENST00000591146 634 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 BNIP3P25-201ENST00000596023 559 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 BPIFA4P-203ENST00000603168 689 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 IGHV3-29-201ENST00000604817 344 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 PART1_1.1-201ENST00000611761 217 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC004696.1-201ENST00000614345 607 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AL357559.1-201ENST00000622228 274 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC005086.4-201ENST00000623065 213 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Z73965.1-201ENST00000623412 2297 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNU6-1252P-201ENST00000363054 104 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.301-201ENST00000364990 103 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNU6-1013P-201ENST00000384180 107 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 NDUFS5P1-201ENST00000405668 289 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNU2-43P-201ENST00000410306 190 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNU6-387P-201ENST00000411331 105 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RPS23P10-201ENST00000416185 486 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 USP9YP20-201ENST00000419224 558 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC009963.2-201ENST00000453431 138 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNU7-66P-201ENST00000459469 62 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RN7SL481P-201ENST00000477764 299 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 RNU6-864P-201ENST00000516256 108 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC093012.1-202ENST00000549403 582 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 MIR3942-201ENST00000585264 109 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC008521.1-201ENST00000587471 187 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC022432.1-201ENST00000595739 310 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AL592436.1-201ENST00000605135 558 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AL670379.4-201ENST00000605279 254 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC010680.4-201ENST00000605334 543 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.812-201ENST00000610788 101 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.784-201ENST00000613803 101 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.787-201ENST00000616522 101 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.780-201ENST00000617336 101 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.801-201ENST00000619005 101 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC116667.1-201ENST00000604855 2072 ntBASIC4.28□□□□□ -1.72
KCMF1Q9P0J7 AC139713.2-215ENST00000641428 5037 ntBASIC4.28□□□□□ -1.73
KCMF1Q9P0J7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AL139811.1-201ENST00000424779 2299 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 Y_RNA.162-201ENST00000363683 102 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 Y_RNA.167-201ENST00000363735 109 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC110754.1-201ENST00000399740 601 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AL583834.1-201ENST00000406943 343 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 RPL23AP1-201ENST00000428990 471 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC090774.1-201ENST00000435925 246 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 SNORD19B-201ENST00000459623 84 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 RPL5P30-201ENST00000465511 891 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 HMGN1P10-201ENST00000474557 553 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC098591.2-201ENST00000510152 315 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 OR51K1P-201ENST00000510214 950 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC084783.1-201ENST00000565846 910 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 RPL23AP84-201ENST00000571193 464 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC069061.3-201ENST00000582254 823 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 RPL7P50-201ENST00000600588 727 ntBASIC4.27□□□□□ -1.73
KCMF1Q9P0J7 AC008638.3-201ENST00000603341 463 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms