Protein–RNA interactions for Protein: Q9NP61

ARFGAP3, ADP-ribosylation factor GTPase-activating protein 3, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3Q9NP61 RNU1-61P-201ENST00000516107 151 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AC100870.1-201ENST00000522035 505 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AC093012.1-202ENST00000549403 582 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 MTND1P15-201ENST00000579262 949 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 NRBF2P1-201ENST00000587407 859 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AC087683.1-201ENST00000591187 441 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 MIR6868-201ENST00000611215 58 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 AL589743.7-201ENST00000612637 233 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 HULC.1-201ENST00000612720 240 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
ARFGAP3Q9NP61 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
ARFGAP3Q9NP61 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
ARFGAP3Q9NP61 AC073073.2-201ENST00000609827 2578 ntBASIC4.03□□□□□ -1.77
ARFGAP3Q9NP61 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AL359634.1-202ENST00000404721 284 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 MIR1290-201ENST00000408735 78 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 RPS15AP6-201ENST00000420703 385 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 UBE2D3P2-201ENST00000424409 445 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 USP9YP36-201ENST00000424581 829 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 RANP8-201ENST00000444720 713 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 GAPDHP27-201ENST00000447427 1020 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 MTCO2P29-201ENST00000465212 189 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC091435.1-201ENST00000505442 584 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 NDUFB9P3-201ENST00000521269 501 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 KLKP1-201ENST00000595979 403 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AL137849.1-201ENST00000604767 169 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC103710.2-201ENST00000609912 942 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 AC013476.2-201ENST00000614456 459 ntBASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ARFGAP3Q9NP61 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 RNU6-1284P-201ENST00000363701 100 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 RNU6-628P-201ENST00000410675 107 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 BX295541.1-201ENST00000417774 250 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 ELOCP4-201ENST00000420090 333 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AL691449.1-201ENST00000426570 421 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC137499.1-201ENST00000427602 88 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC017083.1-201ENST00000428093 483 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 USP9YP14-201ENST00000430663 563 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 SNORA71B-202ENST00000439232 272 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC084198.1-201ENST00000477747 402 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 VN1R105P-201ENST00000486595 910 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AL132838.2-201ENST00000492041 314 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 RN7SKP298-201ENST00000515950 94 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 Vault.3-201ENST00000516676 95 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC128657.1-201ENST00000549459 145 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 TGIF1P1-201ENST00000558095 802 ntBASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.01□□□□□ -1.77
ARFGAP3Q9NP61 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms