Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-CQ95604 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HLA-CQ95604 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 RNU6-858P-201ENST00000362436 107 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 Y_RNA.81-201ENST00000362997 102 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 RNU6-1249P-201ENST00000363237 111 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 Y_RNA.292-201ENST00000364904 97 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-CQ95604 RNU2-51P-201ENST00000410708 197 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-CQ95604 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-CQ95604 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-CQ95604 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 HIGD1AP2-201ENST00000446367 280 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.82□□□□□ -1.48
HLA-CQ95604 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 SRGNP1-201ENST00000603392 451 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 AC109583.2-201ENST00000617367 129 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 U73479.1-201ENST00000618062 168 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 AC091905.4-201ENST00000623432 202 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HLA-CQ95604 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 AC097063.1-201ENST00000426714 1797 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 AC020633.1-201ENST00000468439 2247 ntBASIC5.82□□□□□ -1.48
HLA-CQ95604 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-CQ95604 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-CQ95604 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HLA-CQ95604 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-CQ95604 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-CQ95604 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-CQ95604 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-CQ95604 RNU6-227P-201ENST00000362865 103 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RNA5SP87-201ENST00000384155 118 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RNU2-20P-201ENST00000410425 191 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-CQ95604 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-CQ95604 AC004129.2-201ENST00000457229 287 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RNU7-87P-201ENST00000459343 62 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RPL23AP45-201ENST00000476406 468 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RPL21P13-201ENST00000488305 481 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RN7SL591P-201ENST00000496150 292 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RN7SKP288-201ENST00000516227 268 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 RN7SKP234-201ENST00000517173 224 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-CQ95604 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-CQ95604 AC084851.1-201ENST00000529105 249 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-CQ95604 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-CQ95604 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-CQ95604 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-CQ95604 AC120057.2-201ENST00000571520 271 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 MIR4282-201ENST00000583613 67 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 SNORD113-5-201ENST00000607261 78 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 AC025574.2-201ENST00000615621 514 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 AL590240.4-201ENST00000616908 390 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-CQ95604 AC007159.1-201ENST00000566529 4706 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 ZNF826P-207ENST00000622273 1910 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 AC018809.2-201ENST00000602436 3823 ntBASIC5.81□□□□□ -1.48
HLA-CQ95604 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-CQ95604 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-CQ95604 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-CQ95604 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 AC005224.3-201ENST00000584683 2140 ntBASIC5.8□□□□□ -1.48
HLA-CQ95604 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-CQ95604 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.8□□□□□ -1.48
HLA-CQ95604 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms