Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 SNRPFP4-201ENST00000456366 242 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC108059.3-201ENST00000456388 214 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC010631.1-201ENST00000474150 156 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 FCF1P3-201ENST00000496394 590 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC010587.1-201ENST00000505809 469 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC079140.3-201ENST00000511111 550 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 GMPSP1-201ENST00000514075 579 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 RNU6-390P-201ENST00000516259 103 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 Y_RNA.672-201ENST00000516289 104 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 RNA5SP164-201ENST00000516533 110 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC055876.1-202ENST00000567053 138 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC137800.2-201ENST00000574375 120 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AP002826.1-201ENST00000608835 315 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 AC004777.1-201ENST00000624317 287 ntBASIC3.14□□□□□ -1.91
CCDC107Q8WV48 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.14□□□□□ -1.91
CCDC107Q8WV48 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 OR1S2-201ENST00000302592 978 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 OR5J1P-201ENST00000313544 939 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RNU4-75P-201ENST00000364621 146 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 SNORA73.2-201ENST00000364946 201 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 SNORA62-201ENST00000365493 153 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 MIR514A1-201ENST00000385133 98 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RNA5SP424-201ENST00000390988 115 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RNU6-628P-201ENST00000410675 107 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 HMGB3P23-201ENST00000414981 585 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 ISCA1P6-201ENST00000427740 390 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AL589823.1-201ENST00000429577 183 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 DLGAP5P1-201ENST00000430307 464 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 BX679664.1-201ENST00000434429 253 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 OR4C10P-201ENST00000434991 931 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC104850.1-201ENST00000435940 476 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC244505.5-201ENST00000443639 207 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC140076.1-201ENST00000449897 361 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 MTND1P27-201ENST00000451117 902 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 TPT1P7-201ENST00000458300 517 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 U3.44-201ENST00000458938 192 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RPS23P3-201ENST00000470993 430 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 VN1R105P-201ENST00000486595 910 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RN7SL323P-201ENST00000494712 295 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 ARL2BPP4-201ENST00000506854 471 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC110768.1-201ENST00000509222 400 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 SNORA18.6-201ENST00000516792 115 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 RNU6-352P-201ENST00000516908 107 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 IGHV3-76-201ENST00000522465 295 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC008011.1-201ENST00000545989 227 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC004024.1-201ENST00000549244 247 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AL391156.1-201ENST00000554965 554 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC006116.10-201ENST00000591836 581 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AL590392.1-201ENST00000604960 446 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 SNORA62.6-201ENST00000606322 83 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC103591.3-201ENST00000608684 209 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC090425.2-201ENST00000608818 501 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AP000254.1-201ENST00000609934 520 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CCDC107Q8WV48 MIR378J-201ENST00000611988 109 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 uc_338.12-201ENST00000616344 181 ntBASIC3.13□□□□□ -1.91
CCDC107Q8WV48 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms