Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
TRIM48Q8IWZ4 MFSD8-216ENST00000641147 4009 ntBASIC4.49□□□□□ -1.69
TRIM48Q8IWZ4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AL391684.1-202ENST00000641293 1636 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RN7SKP44-201ENST00000363602 316 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RNU6-1284P-201ENST00000363701 100 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 Y_RNA.202-201ENST00000364083 110 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 Y_RNA.445-201ENST00000384168 102 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RNU6-308P-201ENST00000390957 107 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RNU4-46P-201ENST00000410818 138 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RPL37P10-201ENST00000412884 288 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RPS27AP1-201ENST00000475545 471 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RN7SL432P-201ENST00000484057 298 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AL163540.1-201ENST00000485382 386 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC090096.1-201ENST00000489168 390 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 TBCAP3-201ENST00000512475 312 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RNU6-390P-201ENST00000516259 103 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC134698.5-201ENST00000519444 336 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC103783.1-201ENST00000520506 373 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC009643.1-201ENST00000532030 391 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AL163153.1-201ENST00000554223 283 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC105129.1-201ENST00000560250 297 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 RN7SL176P-201ENST00000580352 264 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC006254.3-201ENST00000603353 884 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AL158032.1-201ENST00000605401 106 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC022893.3-201ENST00000607665 437 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC243312.2-201ENST00000623340 601 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC110801.1-201ENST00000623590 212 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 AC121333.1-201ENST00000567488 2709 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 OR56B2P-202ENST00000641377 2453 ntBASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.48□□□□□ -1.69
TRIM48Q8IWZ4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 DDX10P1-201ENST00000448545 1933 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RNA5SP219-201ENST00000390940 113 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 MIR1250-201ENST00000408098 113 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 SSXP9-201ENST00000417503 292 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AC099677.1-201ENST00000420575 175 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RPL23AP1-201ENST00000428990 471 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RPS27AP12-201ENST00000429552 465 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 ELOCP18-201ENST00000434209 337 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 MTCO3P45-201ENST00000443036 613 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 SCARNA10-201ENST00000459255 330 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AC130509.1-201ENST00000464158 433 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AC098591.2-201ENST00000510152 315 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 OR51K1P-201ENST00000510214 950 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RNU6-123P-201ENST00000516163 102 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RNU6-256P-201ENST00000516747 97 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 Y_RNA.711-201ENST00000516993 102 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RNA5SP454-201ENST00000517231 127 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RANP3-201ENST00000530970 276 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AL121576.1-201ENST00000556055 276 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AC006270.2-201ENST00000578523 652 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 DPPA3P3-201ENST00000603842 430 ntBASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM48Q8IWZ4 MAPK10-303ENST00000641324 3959 ntBASIC4.46□□□□□ -1.69
TRIM48Q8IWZ4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.46□□□□□ -1.69
TRIM48Q8IWZ4 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms