Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RPL23AP65-201ENST00000475608 468 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.654-201ENST00000497848 106 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AC117522.3-201ENST00000507974 584 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 KLHL2P1-201ENST00000508691 521 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 MIR3160-1-201ENST00000577972 85 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 IGHV3-29-201ENST00000604817 344 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 AL133255.1-201ENST00000606374 441 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.812-201ENST00000610788 101 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.784-201ENST00000613803 101 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.787-201ENST00000616522 101 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.780-201ENST00000617336 101 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.801-201ENST00000619005 101 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 MFSD8-242ENST00000641690 4199 ntBASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RUFY4Q6ZNE9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC104118.1-201ENST00000607625 1589 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 XIAPP3-201ENST00000312918 795 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-692P-201ENST00000384496 107 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 SOD2P1-201ENST00000396543 562 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AF228730.4-201ENST00000421457 183 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AL162395.1-201ENST00000457882 422 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC098591.2-201ENST00000510152 315 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 NARSP2-201ENST00000518524 679 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC026464.5-201ENST00000562497 722 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC007224.1-201ENST00000564410 144 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AC174048.1-201ENST00000603389 144 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AL592436.1-201ENST00000605135 558 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AL034351.1-201ENST00000605288 668 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AL390240.1-201ENST00000612950 384 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 C2orf27A-204ENST00000623058 969 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 LDHAL6CP-202ENST00000550738 3224 ntBASIC5□□□□□ -1.61
RUFY4Q6ZNE9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RUFY4Q6ZNE9 AL049555.1-201ENST00000562834 1933 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AP001350.1-201ENST00000601906 1524 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 TPTE2P4-201ENST00000258589 1605 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-1287P-201ENST00000362914 107 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RNA5SP28-201ENST00000363841 119 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-188P-201ENST00000364207 107 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.373-201ENST00000365600 103 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.414-201ENST00000384011 101 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RNU6-1060P-201ENST00000384664 107 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 Y_RNA.576-201ENST00000384781 102 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 MIR23A-201ENST00000385245 73 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 SDHCP2-201ENST00000398565 501 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 MIR921-201ENST00000401133 56 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC114491.1-201ENST00000416095 246 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 RPL7P46-201ENST00000425129 740 ntBASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.99□□□□□ -1.61
RUFY4Q6ZNE9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms