Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
COL13A1Q5TAT6 AL360270.2-201ENST00000562952 5985 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 Y_RNA.380-201ENST00000365663 111 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 RNU6-101P-201ENST00000410323 104 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC053481.1-201ENST00000467217 306 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC090602.1-201ENST00000469695 252 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC074250.1-201ENST00000511117 192 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC016065.2-201ENST00000514530 444 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 RNU6-27P-201ENST00000516146 107 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 CYCSP27-201ENST00000527643 293 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 HSPE1P5-201ENST00000561489 272 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AL109918.3-201ENST00000603072 338 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AL355812.1-201ENST00000603215 216 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AL355297.3-201ENST00000604082 446 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC018889.1-201ENST00000605372 397 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC020634.1-201ENST00000608701 549 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AC107871.2-201ENST00000612894 502 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 AL732372.2-225ENST00000642124 456 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 CDC27P3-201ENST00000635418 1910 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 MTCO1P24-201ENST00000515438 1558 ntBASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL13A1Q5TAT6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC093775.1-201ENST00000624154 1868 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 OR14L1P-202ENST00000641545 3009 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RNU1-136P-201ENST00000384181 164 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AL590704.1-201ENST00000402856 794 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RNU6-293P-201ENST00000411259 106 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RPL21P24-201ENST00000413752 448 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AL356968.1-201ENST00000416622 474 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC091286.1-201ENST00000431233 461 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 HIGD1AP11-201ENST00000438361 280 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 SNORD5.1-201ENST00000458800 75 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 snoU109.4-201ENST00000458953 143 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RPL22P13-201ENST00000493291 347 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RBBP4P6-201ENST00000508098 202 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RNY3P15-201ENST00000516297 97 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RNU6-388P-201ENST00000517012 105 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RNU6-389P-201ENST00000517048 105 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RN7SL652P-201ENST00000577769 300 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 BDH2P1-201ENST00000602288 736 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC244107.2-201ENST00000611773 76 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC116447.1-201ENST00000613153 453 ntBASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL13A1Q5TAT6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
COL13A1Q5TAT6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms