Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
SLC6A12P48065 AL445264.1-201ENST00000621719 171 ntBASIC3.28□□□□□ -1.88
SLC6A12P48065 AL392088.2-201ENST00000637607 285 ntBASIC3.28□□□□□ -1.88
SLC6A12P48065 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A12P48065 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SLC6A12P48065 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SLC6A12P48065 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SLC6A12P48065 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SLC6A12P48065 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 AC006378.2-201ENST00000623178 2476 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SLC6A12P48065 SNORA63.1-201ENST00000362493 131 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 RNU6-173P-201ENST00000364215 104 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 MIR218-2-201ENST00000385006 110 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AL136372.1-201ENST00000403060 228 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 Y_RNA.599-201ENST00000410489 109 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 RNU2-16P-201ENST00000410712 136 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AC109780.2-201ENST00000413467 845 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.27□□□□□ -1.89
SLC6A12P48065 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 HSPE1P28-201ENST00000443139 211 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 RPL17P49-201ENST00000443728 411 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 ELOCP30-201ENST00000447108 299 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AC023424.2-201ENST00000493479 777 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 FCF1P8-201ENST00000510322 597 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 RNU6-1231P-201ENST00000517185 103 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AC022861.1-201ENST00000522981 663 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AP002748.2-201ENST00000528671 348 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AP004247.1-201ENST00000531556 1289 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 AC013828.2-201ENST00000532487 235 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.27□□□□□ -1.89
SLC6A12P48065 MED28P6-201ENST00000558776 231 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.27□□□□□ -1.89
SLC6A12P48065 AC083760.1-201ENST00000589621 670 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.27□□□□□ -1.89
SLC6A12P48065 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 ZNF807-201ENST00000328088 1707 ntBASIC3.27□□□□□ -1.89
SLC6A12P48065 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SLC6A12P48065 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A12P48065 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A12P48065 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SLC6A12P48065 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SLC6A12P48065 RNU6-348P-201ENST00000384386 107 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 RNU6-769P-201ENST00000384407 104 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AL663109.1-201ENST00000411498 844 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A12P48065 ARF4P2-201ENST00000430209 526 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A12P48065 SNRPEP7-201ENST00000438350 220 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AL831737.1-201ENST00000441288 271 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AC002381.1-201ENST00000447049 280 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AL353691.1-201ENST00000451332 387 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC011825.1-201ENST00000484967 388 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 RPL21P13-201ENST00000488305 481 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SLC6A12P48065 ARL2BPP4-201ENST00000506854 471 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A12P48065 FABP5P5-201ENST00000515537 406 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A12P48065 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC068587.4-201ENST00000533893 186 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AL163153.1-201ENST00000554223 283 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 MIR5697-201ENST00000578045 78 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 MIR4307-201ENST00000582802 84 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC087683.1-201ENST00000591187 441 ntBASIC3.26□□□□□ -1.89
SLC6A12P48065 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.26□□□□□ -1.89
SLC6A12P48065 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms