Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 TEX21P-201ENST00000447107 1476 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN1O95832 GABPAP-201ENST00000419271 1356 ntBASIC3.15□□□□□ -1.9
CLDN1O95832 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN1O95832 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CLDN1O95832 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN1O95832 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN1O95832 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CLDN1O95832 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN1O95832 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN1O95832 RNU6-348P-201ENST00000384386 107 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 Y_RNA.493-201ENST00000384422 102 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 MT-TC-201ENST00000387405 66 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 RNU6-328P-201ENST00000390887 106 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN1O95832 MTCO3P41-201ENST00000414801 328 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.15□□□□□ -1.91
CLDN1O95832 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN1O95832 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN1O95832 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN1O95832 AL356583.2-201ENST00000426536 280 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 BX890604.2-201ENST00000427883 474 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 PGBD4P3-201ENST00000440731 581 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC092473.1-201ENST00000441098 221 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 ATP5C1P1-201ENST00000441945 895 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN1O95832 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN1O95832 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN1O95832 AC023424.2-201ENST00000493479 777 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN1O95832 AC021146.1-201ENST00000511202 716 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 RN7SKP209-201ENST00000516888 304 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AP003033.1-201ENST00000527244 415 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AP003497.1-201ENST00000528472 562 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC022878.1-201ENST00000530684 149 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AP004242.1-201ENST00000533701 349 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
CLDN1O95832 SETP7-201ENST00000552169 453 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.15□□□□□ -1.91
CLDN1O95832 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.15□□□□□ -1.91
CLDN1O95832 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN1O95832 AC006023.1-201ENST00000603944 259 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC112191.3-201ENST00000604371 277 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC004853.1-201ENST00000604902 698 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AC040168.1-201ENST00000623594 991 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 AL359740.1-201ENST00000624340 592 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN1O95832 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN1O95832 AP000553.6-201ENST00000641242 118 ntBASIC3.15□□□□□ -1.91
CLDN1O95832 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN1O95832 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN1O95832 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CLDN1O95832 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN1O95832 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLDN1O95832 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
CLDN1O95832 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN1O95832 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN1O95832 RNU5F-7P-201ENST00000363696 115 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 Y_RNA.359-201ENST00000365498 102 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CLDN1O95832 RNU6-533P-201ENST00000384144 107 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 RNU6-297P-201ENST00000384636 107 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 RNA5SP424-201ENST00000390988 115 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 RPL7P25-201ENST00000404151 721 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 Y_RNA.608-201ENST00000410647 95 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 CKS1BP5-201ENST00000434172 273 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN1O95832 AC108734.1-201ENST00000439549 399 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 AL022238.1-201ENST00000442557 355 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AC025750.2-201ENST00000442609 450 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 FAM103A2P-201ENST00000444122 354 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN1O95832 USP9YP12-201ENST00000450481 570 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN1O95832 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 AC104308.1-201ENST00000454621 333 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 RPL27AP5-201ENST00000469428 449 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN1O95832 AC093663.1-201ENST00000497190 394 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AC097462.2-201ENST00000504623 481 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 COX7A2P2-201ENST00000505291 250 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 AC010486.1-201ENST00000511793 424 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 RNU6-405P-201ENST00000516637 110 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN1O95832 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN1O95832 MIR5004-201ENST00000579078 107 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 MIR5047-201ENST00000579212 100 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN1O95832 UBE2L4-201ENST00000587688 464 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AC079089.3-201ENST00000603094 673 ntBASIC3.14□□□□□ -1.91
CLDN1O95832 AL033523.1-201ENST00000605153 153 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms