Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 RNA5SP291-201ENST00000517222 105 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 AP004242.1-201ENST00000533701 349 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 CYCSP38-201ENST00000559840 322 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 AC090877.1-201ENST00000561418 344 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 MT1CP-201ENST00000567054 174 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 RN7SL230P-201ENST00000580835 303 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 AC093535.2-201ENST00000624769 2326 ntBASIC7.32□□□□□ -1.24
SPDYE4A6NLX3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 STAG3L4-201ENST00000352103 530 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 RNU6-873P-201ENST00000363833 107 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 RNU1-65P-201ENST00000363919 148 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 Y_RNA.309-201ENST00000365046 111 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 RNU6-1310P-201ENST00000384153 107 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 RNU6-1199P-201ENST00000411249 104 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 DDX39BP1-205ENST00000422507 192 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AL355433.1-201ENST00000422804 300 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 CYCSP52-201ENST00000422857 310 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 RPL23AP40-201ENST00000487630 390 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 RNA5SP54-201ENST00000516951 92 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AC021269.2-201ENST00000532318 330 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 MIR5571-201ENST00000577998 113 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 MIR4420-201ENST00000583944 77 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AC012368.3-201ENST00000604190 219 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 uc_338.29-201ENST00000615099 168 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AC091932.3-201ENST00000624223 323 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 BCLAF1P2-201ENST00000624956 2609 ntBASIC7.31□□□□□ -1.24
SPDYE4A6NLX3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC140134.1-201ENST00000511830 3544 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 RN7SKP107-201ENST00000364157 290 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 RNU6-1144P-201ENST00000384247 104 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC007568.1-201ENST00000422912 471 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 RPS27AP3-201ENST00000453803 454 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 RNU7-197P-201ENST00000458836 62 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 RNA5SP228-201ENST00000516232 133 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 RNA5SP278-201ENST00000517055 102 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 MIR3921-201ENST00000577308 85 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AL162431.4-201ENST00000604674 411 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC024940.4-201ENST00000605507 246 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 MIR6071-201ENST00000616741 78 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 AC116667.2-201ENST00000641075 823 ntBASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SPDYE4A6NLX3 DOCK11P1-201ENST00000553480 5932 ntBASIC7.29□□□□□ -1.24
SPDYE4A6NLX3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC7.29□□□□□ -1.24
SPDYE4A6NLX3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SPDYE4A6NLX3 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SPDYE4A6NLX3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
SPDYE4A6NLX3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms