Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 RNU6-712P-201ENST00000410558 100 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 COX5BP7-201ENST00000414780 274 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC079809.1-201ENST00000415468 276 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AL160275.3-201ENST00000423876 471 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AL591212.2-201ENST00000433923 257 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 snoU13.3-201ENST00000459441 104 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 RPL31P60-201ENST00000478450 367 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 AC005899.2-201ENST00000584353 90 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.81□□□□□ -1.48
USP17L3A6NCW0 THAP12P5-201ENST00000405864 2275 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 OR56B2P-202ENST00000641377 2453 ntBASIC5.81□□□□□ -1.48
USP17L3A6NCW0 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 SOCS5P3-201ENST00000425115 1576 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.480-201ENST00000384364 102 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.496-201ENST00000384444 101 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 RNU6-306P-201ENST00000384617 107 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 RNU6-837P-201ENST00000391056 108 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 SSXP9-201ENST00000417503 292 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AL162591.2-201ENST00000449634 317 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 HMGB3P30-201ENST00000457863 606 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 CYCSP34-201ENST00000458172 304 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 RPS27AP13-201ENST00000498403 237 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AC022493.2-201ENST00000506122 481 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 RN7SKP258-201ENST00000517151 304 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 OR8R1P-201ENST00000543943 764 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AC040958.1-201ENST00000561102 201 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 AC005592.1-201ENST00000566527 1640 ntBASIC5.8□□□□□ -1.48
USP17L3A6NCW0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.8□□□□□ -1.48
USP17L3A6NCW0 TLK1P1-201ENST00000456760 2440 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AL158163.1-201ENST00000603915 1649 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.574-201ENST00000384766 95 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC004975.1-201ENST00000428733 208 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 RPL23AP50-201ENST00000434149 455 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 RPS17P8-201ENST00000434525 335 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC084198.1-201ENST00000477747 402 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AP000926.1-201ENST00000479573 241 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 HMGB1P30-201ENST00000492455 606 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 RN7SL558P-201ENST00000497468 299 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 SCARNA16.2-201ENST00000516520 172 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 RNU6-264P-201ENST00000517134 104 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 Y_RNA.721-201ENST00000517207 102 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 RN7SL652P-201ENST00000577769 300 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC113195.1-201ENST00000579952 141 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC011494.1-201ENST00000596454 237 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 AC011373.1-201ENST00000607270 237 ntBASIC5.79□□□□□ -1.48
USP17L3A6NCW0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
USP17L3A6NCW0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms