Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 RNU2-43P-201ENST00000410306 190 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 BEND7P1-201ENST00000422058 457 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 HMGN2P38-201ENST00000423806 265 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 MTND4P24-201ENST00000424002 397 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 FCF1P1-201ENST00000432690 571 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AL513328.1-201ENST00000446460 224 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC096576.1-201ENST00000489014 359 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC090255.1-201ENST00000495779 349 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC011352.3-201ENST00000505162 593 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 SUMO2P6-201ENST00000505273 288 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 COL6A4P2-205ENST00000509855 506 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 TRAV11-201ENST00000539512 339 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 CR383656.7-201ENST00000548164 174 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 SETP7-201ENST00000552169 453 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC105137.2-201ENST00000569073 466 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 SNORD53-201ENST00000579969 78 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 MIR1291-201ENST00000627649 87 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AC016717.2-201ENST00000609089 5141 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 AL049641.1-201ENST00000441055 1948 ntBASIC1.72□□□□□ -2.13
TRAV4A0A0B4J268 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.71□□□□□ -2.13
TRAV4A0A0B4J268 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 SNORA5B-201ENST00000363786 132 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 RNU2-47P-201ENST00000410649 186 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL512637.2-201ENST00000431287 1256 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL831737.1-201ENST00000441288 271 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL109933.2-201ENST00000452651 260 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 NDUFA5P7-201ENST00000452914 242 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 RPS27P21-201ENST00000486977 252 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 RPL36AP51-201ENST00000487216 318 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC113420.1-201ENST00000507903 571 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC112673.1-201ENST00000513168 575 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AP003467.2-201ENST00000520175 319 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC061975.8-201ENST00000587058 721 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC021749.1-201ENST00000604322 607 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL033523.1-201ENST00000605153 153 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 MIR6817-201ENST00000615588 66 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC090132.2-201ENST00000615881 347 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AC006213.4-201ENST00000616184 634 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL031601.2-202ENST00000622650 282 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AP003485.2-201ENST00000623636 610 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 AL365361.1-201ENST00000566942 3481 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 CKAP2P1-201ENST00000555477 2049 ntBASIC1.71□□□□□ -2.14
TRAV4A0A0B4J268 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 MIRLET7G-201ENST00000362280 84 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 RNA5SP68-201ENST00000363885 119 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 MIR518C-201ENST00000384822 101 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 MIR135A2-201ENST00000384854 100 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 U3.26-201ENST00000391236 204 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 AP002784.2-201ENST00000397300 549 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 HMGB3P2-201ENST00000411913 584 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 NDUFB4P7-201ENST00000423198 363 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 DDX3P2-201ENST00000446138 111 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 LINC00888-204ENST00000487386 421 ntBASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.7□□□□□ -2.14
TRAV4A0A0B4J268 SCARNA17.1-201ENST00000516211 143 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms