Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AP004289.2-201ENST00000444413 1457 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 AC087190.4-201ENST00000574616 8334 ntBASIC4.67□□□□□ -1.66
PPARGC1AQ9UBK2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 DDX10P1-201ENST00000448545 1933 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AC121333.1-201ENST00000567488 2709 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SKP44-201ENST00000363602 316 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-831P-201ENST00000384548 107 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MIR659-201ENST00000384963 97 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5SP332-201ENST00000391063 115 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5SP239-201ENST00000410218 129 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RNU4-46P-201ENST00000410818 138 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 NDUFB4P5-201ENST00000415445 361 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RPL26P29-201ENST00000415623 438 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AC068533.1-201ENST00000418542 415 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 USP9YP20-201ENST00000419224 558 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MTCO2P12-201ENST00000427426 682 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 CALM2P2-201ENST00000428512 440 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MRPS18BP2-201ENST00000434310 759 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RPL23AP33-201ENST00000442301 452 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AC007967.1-201ENST00000455422 1159 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 snoU13.3-201ENST00000459441 104 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-1208P-201ENST00000459588 107 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RPL7AP28-201ENST00000464513 571 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AP000926.1-201ENST00000479573 241 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.654-201ENST00000497848 106 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 uc_338.34-201ENST00000617467 174 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SL722P-201ENST00000617780 284 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SL565P-201ENST00000618246 284 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AP005019.3-201ENST00000620418 560 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 MIR4275-201ENST00000636486 87 ntBASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PPARGC1AQ9UBK2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
PPARGC1AQ9UBK2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PPARGC1AQ9UBK2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PPARGC1AQ9UBK2 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PPARGC1AQ9UBK2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.65□□□□□ -1.66
PPARGC1AQ9UBK2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
PPARGC1AQ9UBK2 RNA5SP28-201ENST00000363841 119 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 SNORD115-7-201ENST00000365306 82 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RNU6-61P-201ENST00000365528 109 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RN7SKP159-201ENST00000410657 292 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RPL21P24-201ENST00000413752 448 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL137014.1-201ENST00000420490 1226 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 FTH1P6-201ENST00000430768 320 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL590399.6-201ENST00000446396 307 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 MTND4P19-201ENST00000446659 478 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 Y_RNA.632-201ENST00000459189 102 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RN7SL738P-201ENST00000470264 297 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RPL23AP65-201ENST00000475608 468 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 TTC39CP1-201ENST00000512513 755 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 NARSP2-201ENST00000518524 679 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL137161.1-201ENST00000532231 390 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 OR5B10P-201ENST00000532869 642 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL121821.2-201ENST00000556081 394 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AC008638.3-201ENST00000603341 463 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL592436.1-201ENST00000605135 558 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RNA5SP108-201ENST00000605921 117 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 RAD17P1-201ENST00000418130 2042 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 AC244517.1-201ENST00000606030 2086 ntBASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PPARGC1AQ9UBK2 MFSD8-242ENST00000641690 4199 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms