Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC135279.1-201ENST00000543493 504 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 AC002546.1-201ENST00000588041 2504 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 CUL4AP1-201ENST00000514750 1863 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 RNU1-22P-201ENST00000363334 158 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 SNORD48-201ENST00000364953 64 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 RNA5SP138-201ENST00000365098 114 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 MTND4LP21-201ENST00000415303 295 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
IFT140Q96RY7 RNA5SP82-201ENST00000516707 92 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.55□□□□□ -2
IFT140Q96RY7 AL592494.3-201ENST00000609485 464 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 MIR6515-201ENST00000619843 57 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 AL133216.2-202ENST00000634512 349 ntBASIC2.55□□□□□ -2
IFT140Q96RY7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.54□□□□□ -2
IFT140Q96RY7 AC240504.1-201ENST00000395709 845 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.54□□□□□ -2
IFT140Q96RY7 AC017099.1-201ENST00000448261 1028 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.54□□□□□ -2
IFT140Q96RY7 CALM1P2-201ENST00000452941 448 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AC092991.1-201ENST00000477176 376 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.54□□□□□ -2
IFT140Q96RY7 AC005912.1-201ENST00000495392 255 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AC090255.1-201ENST00000495779 349 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AC034244.1-201ENST00000507687 207 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 FAM106CP-201ENST00000582212 507 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
IFT140Q96RY7 AC098679.5-201ENST00000624394 571 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AL136164.4-201ENST00000625013 2135 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.54□□□□□ -2
IFT140Q96RY7 MTND4P34-201ENST00000572715 1371 ntBASIC2.54□□□□□ -2
IFT140Q96RY7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.54□□□□□ -2
IFT140Q96RY7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IFT140Q96RY7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.53□□□□□ -2
IFT140Q96RY7 OR51B8P-201ENST00000449892 769 ntBASIC2.53□□□□□ -2
IFT140Q96RY7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.53□□□□□ -2
IFT140Q96RY7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.53□□□□□ -2
IFT140Q96RY7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.53□□□□□ -2
IFT140Q96RY7 DUXAP9-208ENST00000622815 614 ntBASIC2.53□□□□□ -2
IFT140Q96RY7 SNORD56.5-201ENST00000364281 72 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 RNU6-342P-201ENST00000384521 104 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 RPL31P2-201ENST00000413849 377 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.52□□□□□ -2.01
IFT140Q96RY7 ACTR3BP3-201ENST00000565577 979 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 AC006023.2-201ENST00000609916 167 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IFT140Q96RY7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.52□□□□□ -2.01
IFT140Q96RY7 RNA5SP105-201ENST00000391123 113 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.52□□□□□ -2.01
IFT140Q96RY7 RNU6-1218P-201ENST00000458990 108 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 AL137100.2-201ENST00000555786 315 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 MIR6078-201ENST00000611069 100 ntBASIC2.52□□□□□ -2.01
IFT140Q96RY7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
IFT140Q96RY7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
IFT140Q96RY7 MIR92A2-201ENST00000385299 75 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
IFT140Q96RY7 BX682237.1-201ENST00000415016 335 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.51□□□□□ -2.01
IFT140Q96RY7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
IFT140Q96RY7 DPPA3P1-201ENST00000448050 469 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
IFT140Q96RY7 AC010683.1-201ENST00000473673 378 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.51□□□□□ -2.01
IFT140Q96RY7 AP005660.1-201ENST00000522972 293 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.51□□□□□ -2.01
IFT140Q96RY7 SYF2P1-201ENST00000550658 413 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 AL049838.1-201ENST00000563647 981 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.51□□□□□ -2.01
IFT140Q96RY7 OR4K8P-201ENST00000578842 1048 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 AP001029.3-201ENST00000588063 596 ntBASIC2.51□□□□□ -2.01
IFT140Q96RY7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
IFT140Q96RY7 MTND4P1-201ENST00000457501 1466 ntBASIC2.5□□□□□ -2.01
IFT140Q96RY7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
IFT140Q96RY7 RPS6P15-201ENST00000431996 751 ntBASIC2.5□□□□□ -2.01
IFT140Q96RY7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.5□□□□□ -2.01
IFT140Q96RY7 MED6P1-201ENST00000439659 713 ntBASIC2.5□□□□□ -2.01
IFT140Q96RY7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.5□□□□□ -2.01
IFT140Q96RY7 AC023424.2-201ENST00000493479 777 ntBASIC2.5□□□□□ -2.01
IFT140Q96RY7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
IFT140Q96RY7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.5□□□□□ -2.01
IFT140Q96RY7 AC007115.1-201ENST00000546853 234 ntBASIC2.5□□□□□ -2.01
IFT140Q96RY7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.5□□□□□ -2.01
IFT140Q96RY7 MIR6767-201ENST00000637302 66 ntBASIC2.5□□□□□ -2.01
IFT140Q96RY7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.5□□□□□ -2.01
IFT140Q96RY7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
IFT140Q96RY7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
IFT140Q96RY7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
IFT140Q96RY7 RNU4-7P-201ENST00000364758 141 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.49□□□□□ -2.01
IFT140Q96RY7 Z96811.1-201ENST00000445880 108 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 AL031659.1-201ENST00000447075 539 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.49□□□□□ -2.01
IFT140Q96RY7 HMGN2P13-201ENST00000476476 274 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 TRBV8-1-201ENST00000481590 279 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 AC135721.1-201ENST00000497954 479 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 SEM1P1-201ENST00000506694 209 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 LTV1P1-201ENST00000510683 1237 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.49□□□□□ -2.01
IFT140Q96RY7 AC006249.1-201ENST00000621223 471 ntBASIC2.49□□□□□ -2.01
IFT140Q96RY7 AL157700.1-201ENST00000561973 1432 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms