Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC38Q502W7 FARSBP1-201ENST00000435808 1778 ntBASIC3.97□□□□□ -1.77
CCDC38Q502W7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC38Q502W7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CCDC38Q502W7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC090740.1-201ENST00000623193 2262 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC38Q502W7 RNU4-24P-201ENST00000364565 139 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 SNORA70C-201ENST00000384538 135 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 MIR514A1-201ENST00000385133 98 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 RPS26P8-201ENST00000393490 348 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 RPL21P65-201ENST00000406094 466 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 U3.42-201ENST00000408746 214 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 RN7SKP263-201ENST00000411194 309 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 CDK8P2-201ENST00000415020 547 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 RPS15AP6-201ENST00000420703 385 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 RPL21P109-201ENST00000422213 475 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL356867.1-201ENST00000429623 299 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC016696.1-201ENST00000446949 318 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 NUTF2P7-201ENST00000453086 375 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 MTCO2P29-201ENST00000465212 189 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL049714.1-201ENST00000466686 347 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 RN7SL330P-201ENST00000469709 307 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL049874.1-201ENST00000489560 388 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC010587.1-201ENST00000505809 469 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 MIR2116-201ENST00000517221 80 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC087369.1-201ENST00000520775 996 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL355836.1-201ENST00000555951 870 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 MIR4425-201ENST00000580572 84 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 MIR4293-201ENST00000584305 78 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC090578.1-201ENST00000604955 591 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 RNU4-89P-201ENST00000607443 133 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AL451064.1-201ENST00000607718 471 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 AP000254.1-201ENST00000609934 520 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC010133.1-201ENST00000615809 842 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC068831.8-201ENST00000620171 435 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 AC008568.2-201ENST00000623862 2313 ntBASIC3.96□□□□□ -1.78
CCDC38Q502W7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.96□□□□□ -1.78
CCDC38Q502W7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CCDC38Q502W7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC38Q502W7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC38Q502W7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC38Q502W7 OR1S2-201ENST00000302592 978 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 U8.3-201ENST00000363321 132 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNU6-1284P-201ENST00000363701 100 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNU4-1-201ENST00000363925 141 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNU1-39P-201ENST00000383897 165 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RPL23AP32-201ENST00000395315 459 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AP000567.1-201ENST00000406413 156 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNA5SP317-201ENST00000410176 116 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNA5SP311-201ENST00000411290 116 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC007899.1-201ENST00000412776 775 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 MORF4L1P6-201ENST00000418771 268 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RPS15AP12-201ENST00000419498 388 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC119618.1-201ENST00000434191 222 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC009961.2-201ENST00000435771 251 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC244505.5-201ENST00000443639 207 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 MTND2P24-201ENST00000453434 806 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC006539.3-201ENST00000454258 129 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RPS20P20-201ENST00000460498 340 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RPS7P7-201ENST00000463499 571 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC010631.1-201ENST00000474150 156 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC026402.1-201ENST00000513642 170 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AC114797.1-201ENST00000514003 728 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNA5SP315-201ENST00000516340 116 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RN7SKP83-201ENST00000516512 178 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 RNA5SP312-201ENST00000517068 116 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC38Q502W7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC38Q502W7 YPEL5P3-201ENST00000547227 352 ntBASIC3.95□□□□□ -1.78
CCDC38Q502W7 AL121576.1-201ENST00000556055 276 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms