Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNORD65C-201ENST00000390962 71 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.04□□□□□ -1.92
COL16A1Q07092 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.04□□□□□ -1.92
COL16A1Q07092 USP9YP26-201ENST00000421008 661 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AC011233.1-201ENST00000422812 283 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.04□□□□□ -1.92
COL16A1Q07092 AL390023.1-201ENST00000428836 262 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AL445567.1-201ENST00000439121 144 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AL157827.1-201ENST00000447622 132 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
COL16A1Q07092 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.04□□□□□ -1.92
COL16A1Q07092 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.04□□□□□ -1.92
COL16A1Q07092 ELOCP32-201ENST00000548625 324 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.04□□□□□ -1.92
COL16A1Q07092 AL049870.4-201ENST00000555741 486 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AC095057.3-201ENST00000567102 1157 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AC068790.6-201ENST00000602558 258 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AC105129.3-201ENST00000605455 485 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 AL121895.2-201ENST00000619558 447 ntBASIC3.04□□□□□ -1.92
COL16A1Q07092 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.04□□□□□ -1.92
COL16A1Q07092 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
COL16A1Q07092 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL16A1Q07092 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL16A1Q07092 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AP005901.5-201ENST00000545779 1796 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.03□□□□□ -1.92
COL16A1Q07092 SNORA25.9-201ENST00000365087 128 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AL590084.1-201ENST00000407885 387 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AL139156.1-201ENST00000412785 841 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 HMGB3P31-201ENST00000413333 595 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL16A1Q07092 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AC092685.1-201ENST00000447960 1243 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AC244505.3-201ENST00000454598 187 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 RPL38P4-201ENST00000502376 214 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AC084024.2-201ENST00000503480 791 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 XKRY-201ENST00000510392 1100 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AC108078.2-201ENST00000510750 236 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 RN7SKP96-201ENST00000516948 297 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AC126177.3-201ENST00000551839 688 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AC008015.1-201ENST00000555505 465 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.03□□□□□ -1.92
COL16A1Q07092 AC245517.5-201ENST00000611529 162 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL16A1Q07092 AL158163.2-201ENST00000619110 700 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AL356266.1-201ENST00000623311 483 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 RPL23AP61-201ENST00000623642 466 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.03□□□□□ -1.92
COL16A1Q07092 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL16A1Q07092 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.03□□□□□ -1.92
COL16A1Q07092 MTND5P19-201ENST00000424872 1794 ntBASIC3.03□□□□□ -1.92
COL16A1Q07092 AC093311.1-201ENST00000506586 2021 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 RNU1-87P-201ENST00000363727 170 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 RNU4-51P-201ENST00000364206 140 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 SNORD116.1-201ENST00000365628 92 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 RNU4-31P-201ENST00000384211 141 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 RNU6-83P-201ENST00000384568 112 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC093084.1-201ENST00000424233 687 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC005345.1-201ENST00000431868 217 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.02□□□□□ -1.93
COL16A1Q07092 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.02□□□□□ -1.93
COL16A1Q07092 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.02□□□□□ -1.93
COL16A1Q07092 HMGB3P8-201ENST00000449709 577 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 SNORD13-201ENST00000459299 104 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC092045.1-201ENST00000495716 1231 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL16A1Q07092 AC025459.1-201ENST00000504072 156 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.02□□□□□ -1.93
COL16A1Q07092 AC118282.2-201ENST00000508739 374 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.02□□□□□ -1.93
COL16A1Q07092 Y_RNA.670-201ENST00000516255 105 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 SCARNA16.3-201ENST00000516595 184 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 MTCO3P15-201ENST00000526563 574 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 DEFB130C-202ENST00000530001 230 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.02□□□□□ -1.93
COL16A1Q07092 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.02□□□□□ -1.93
COL16A1Q07092 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.02□□□□□ -1.93
COL16A1Q07092 AL354943.1-201ENST00000572103 781 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL16A1Q07092 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.02□□□□□ -1.93
COL16A1Q07092 MTND3P19-201ENST00000603825 345 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC013468.1-201ENST00000608680 598 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 TUSC7.1-201ENST00000610969 165 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 HULC.1-201ENST00000612720 240 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC024257.5-201ENST00000612739 531 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AP000676.3-201ENST00000623299 569 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 AC098679.5-201ENST00000624394 571 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL16A1Q07092 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL16A1Q07092 MTCO1P18-201ENST00000455518 1419 ntBASIC3.02□□□□□ -1.93
COL16A1Q07092 RNU6-457P-201ENST00000363999 107 ntBASIC3.01□□□□□ -1.93
COL16A1Q07092 RNU6-1140P-201ENST00000410517 106 ntBASIC3.01□□□□□ -1.93
COL16A1Q07092 RNA5SP270-201ENST00000411361 118 ntBASIC3.01□□□□□ -1.93
COL16A1Q07092 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms