Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RNU6-128P-201ENST00000383976 107 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 CISD1P1-201ENST00000393907 327 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.69□□□□□ -1.5
ATP2B4P23634 RPL35AP21-201ENST00000437667 333 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 RPL23AP24-201ENST00000458203 385 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 SCARNA10-201ENST00000459255 330 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 AC090602.1-201ENST00000469695 252 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.69□□□□□ -1.5
ATP2B4P23634 RPL21P103-201ENST00000479921 488 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.69□□□□□ -1.5
ATP2B4P23634 TBCAP3-201ENST00000512475 312 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 SNORA14.1-201ENST00000516113 141 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 Y_RNA.689-201ENST00000516589 107 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.69□□□□□ -1.5
ATP2B4P23634 AP000827.1-201ENST00000527814 258 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.69□□□□□ -1.5
ATP2B4P23634 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.69□□□□□ -1.5
ATP2B4P23634 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.69□□□□□ -1.5
ATP2B4P23634 AC067852.3-201ENST00000589177 561 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 XIAPP1-201ENST00000603162 600 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 SDR42E1P2-201ENST00000614861 481 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 AC010378.1-201ENST00000619270 362 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 MTND5P42-201ENST00000637720 498 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.69□□□□□ -1.5
ATP2B4P23634 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATP2B4P23634 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATP2B4P23634 MTND5P19-201ENST00000424872 1794 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATP2B4P23634 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATP2B4P23634 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATP2B4P23634 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.69□□□□□ -1.5
ATP2B4P23634 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.69□□□□□ -1.5
ATP2B4P23634 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ATP2B4P23634 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
ATP2B4P23634 MTND5P16-201ENST00000460269 1703 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATP2B4P23634 AL139811.1-201ENST00000424779 2299 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATP2B4P23634 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.68□□□□□ -1.5
ATP2B4P23634 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ATP2B4P23634 Y_RNA.31-201ENST00000362574 102 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 RNU6-562P-201ENST00000362731 107 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 Y_RNA.144-201ENST00000363521 113 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 RN7SKP186-201ENST00000365371 303 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AL391417.1-201ENST00000404100 426 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 ATG3P1-201ENST00000419507 911 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.68□□□□□ -1.5
ATP2B4P23634 PMCHL1-202ENST00000423102 261 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.68□□□□□ -1.5
ATP2B4P23634 RPL23AP69-201ENST00000431134 458 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AL137792.2-201ENST00000443484 235 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 PTMAP3-201ENST00000447474 330 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
ATP2B4P23634 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATP2B4P23634 RNU2-69P-201ENST00000516061 100 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 RN7SKP60-201ENST00000516985 239 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 RNU6-840P-201ENST00000517275 65 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.68□□□□□ -1.5
ATP2B4P23634 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.68□□□□□ -1.5
ATP2B4P23634 MTCO3P23-201ENST00000561363 289 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 MIR4458-201ENST00000578872 75 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AC007619.2-201ENST00000605743 379 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 FAM157A-202ENST00000615155 405 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.68□□□□□ -1.5
ATP2B4P23634 AL355365.1-201ENST00000616480 294 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AC098657.3-201ENST00000620434 263 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 AC068724.3-201ENST00000625906 87 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATP2B4P23634 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.68□□□□□ -1.5
ATP2B4P23634 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.68□□□□□ -1.5
ATP2B4P23634 AC025031.4-201ENST00000621248 3271 ntBASIC5.68□□□□□ -1.5
ATP2B4P23634 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.68□□□□□ -1.5
ATP2B4P23634 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ATP2B4P23634 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATP2B4P23634 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATP2B4P23634 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATP2B4P23634 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATP2B4P23634 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.67□□□□□ -1.5
ATP2B4P23634 Y_RNA.28-201ENST00000362554 111 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 Y_RNA.112-201ENST00000363250 102 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 RNA5SP479-201ENST00000364858 117 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 SDHCP2-201ENST00000398565 501 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.67□□□□□ -1.5
ATP2B4P23634 RPL7AP73-201ENST00000413490 353 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 AC007738.1-201ENST00000413892 348 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 RPS11P1-201ENST00000451072 473 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 RNU6-953P-201ENST00000459154 107 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 RPL21P126-201ENST00000470049 478 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 RN7SL41P-201ENST00000476144 297 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.67□□□□□ -1.5
ATP2B4P23634 RNU6-1069P-201ENST00000516612 133 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 RANP9-201ENST00000519957 271 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.67□□□□□ -1.5
ATP2B4P23634 DYNLL1P4-201ENST00000549314 266 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 AC063950.1-201ENST00000552036 308 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 MIR3939-201ENST00000582614 106 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 MIR5692C1-201ENST00000585309 91 ntBASIC5.67□□□□□ -1.5
ATP2B4P23634 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.67□□□□□ -1.5
ATP2B4P23634 RMST_9.1-201ENST00000619945 193 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms