Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.41□□□□□ -1.54
ERCC3P19447 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.41□□□□□ -1.54
ERCC3P19447 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.41□□□□□ -1.54
ERCC3P19447 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.41□□□□□ -1.54
ERCC3P19447 AC005498.1-201ENST00000592125 465 ntBASIC5.41□□□□□ -1.54
ERCC3P19447 AL117336.2-201ENST00000602435 335 ntBASIC5.41□□□□□ -1.54
ERCC3P19447 AP002826.1-201ENST00000608835 315 ntBASIC5.41□□□□□ -1.54
ERCC3P19447 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.41□□□□□ -1.54
ERCC3P19447 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
ERCC3P19447 A2MP1-204ENST00000566278 4130 ntBASIC5.41□□□□□ -1.54
ERCC3P19447 AL133412.1-201ENST00000380194 2992 ntBASIC5.41□□□□□ -1.54
ERCC3P19447 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
ERCC3P19447 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.4□□□□□ -1.54
ERCC3P19447 AC025031.4-201ENST00000621248 3271 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 RAD17P1-201ENST00000418130 2042 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
ERCC3P19447 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ERCC3P19447 AL139276.1-201ENST00000311910 1001 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
ERCC3P19447 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
ERCC3P19447 DEFB108F-201ENST00000344638 222 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 Y_RNA.11-201ENST00000362375 109 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 RNU6-600P-201ENST00000362524 99 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
ERCC3P19447 MIR514A2-201ENST00000385131 88 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 MIR514A3-201ENST00000385132 88 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AL121834.1-202ENST00000404494 277 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
ERCC3P19447 ARL5AP1-201ENST00000418991 388 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 PDCL2P1-201ENST00000419302 352 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.4□□□□□ -1.54
ERCC3P19447 AC004975.1-201ENST00000428733 208 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 IFNA20P-201ENST00000436840 528 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 BTF3P6-201ENST00000448054 499 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.4□□□□□ -1.54
ERCC3P19447 AC011276.1-201ENST00000469688 323 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AC083904.1-201ENST00000487828 231 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.4□□□□□ -1.54
ERCC3P19447 MED28P6-201ENST00000558776 231 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AC103710.3-201ENST00000608157 948 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 SNORD91B-202ENST00000608459 222 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AC092807.2-201ENST00000609367 243 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AP001486.3-201ENST00000615334 372 ntBASIC5.4□□□□□ -1.54
ERCC3P19447 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.4□□□□□ -1.54
ERCC3P19447 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
ERCC3P19447 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.4□□□□□ -1.55
ERCC3P19447 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
ERCC3P19447 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.4□□□□□ -1.55
ERCC3P19447 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.4□□□□□ -1.55
ERCC3P19447 SALL4P2-201ENST00000423288 2910 ntBASIC5.4□□□□□ -1.55
ERCC3P19447 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
ERCC3P19447 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
ERCC3P19447 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
ERCC3P19447 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
ERCC3P19447 ZNF137P-201ENST00000456718 1920 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.39□□□□□ -1.55
ERCC3P19447 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
ERCC3P19447 RNA5SP167-201ENST00000365461 116 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 Y_RNA.378-201ENST00000365652 113 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 RPL23AP48-201ENST00000406913 488 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 RN7SKP32-201ENST00000410167 303 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.39□□□□□ -1.55
ERCC3P19447 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC3P19447 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC3P19447 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC3P19447 MRPL50P4-201ENST00000446432 475 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 NUTF2P7-201ENST00000453086 375 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.39□□□□□ -1.55
ERCC3P19447 RPL7P19-201ENST00000469948 618 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 RN7SL41P-201ENST00000476144 297 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 RPL36AP41-201ENST00000493820 306 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 Y_RNA.665-201ENST00000516177 98 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.39□□□□□ -1.55
ERCC3P19447 PSMA3P-201ENST00000555485 635 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.39□□□□□ -1.55
ERCC3P19447 RPS3AP23-202ENST00000574601 686 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 VN1R80P-201ENST00000597126 338 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.39□□□□□ -1.55
ERCC3P19447 uc_338.5-201ENST00000611839 155 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 AC112200.1-201ENST00000625015 234 ntBASIC5.39□□□□□ -1.55
ERCC3P19447 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC3P19447 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.39□□□□□ -1.55
ERCC3P19447 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ERCC3P19447 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC3P19447 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.38□□□□□ -1.55
ERCC3P19447 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC3P19447 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ERCC3P19447 RNU4-73P-201ENST00000363164 141 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 SNORA7.2-201ENST00000364446 145 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 RNA5SP509-201ENST00000364577 119 ntBASIC5.38□□□□□ -1.55
ERCC3P19447 AL122016.1-201ENST00000403365 367 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms