Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 MRPS18BP2-201ENST00000434310 759 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 RPL7P36-201ENST00000444633 681 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 RPS20P24-201ENST00000457473 361 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 SNORD42A-201ENST00000459584 64 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 HMGB1P25-201ENST00000468402 607 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 AC034222.1-201ENST00000494052 532 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN1O95832 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 EEF1B2P4-201ENST00000551398 348 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.17□□□□□ -1.9
CLDN1O95832 AC005771.1-201ENST00000585581 349 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN1O95832 AC087683.1-201ENST00000591187 441 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AL590240.3-201ENST00000621416 943 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.17□□□□□ -1.9
CLDN1O95832 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CLDN1O95832 CCT4P2-201ENST00000233836 1548 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.17□□□□□ -1.9
CLDN1O95832 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CLDN1O95832 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 CEP170P1-201ENST00000502249 4587 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLDN1O95832 RPS4XP5-202ENST00000449995 1334 ntBASIC3.17□□□□□ -1.9
CLDN1O95832 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.17□□□□□ -1.9
CLDN1O95832 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN1O95832 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 RNVU1-3-201ENST00000364313 161 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RNU2-15P-201ENST00000410692 191 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RNU6-248P-201ENST00000410720 107 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 HMGN1P14-201ENST00000412459 517 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN1O95832 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 AL353691.1-201ENST00000451332 387 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 HMGB1P15-201ENST00000453854 435 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 TPT1P7-201ENST00000458300 517 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RPL21P13-201ENST00000488305 481 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 TRBV12-2-201ENST00000489763 344 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AP001025.2-201ENST00000490908 477 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN1O95832 RNU6-27P-201ENST00000516146 107 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RNA5SP208-201ENST00000516156 78 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RNA5SP341-201ENST00000516261 117 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RN7SKP116-201ENST00000516902 319 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RNU6-714P-201ENST00000516963 103 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.16□□□□□ -1.9
CLDN1O95832 AL139174.1-201ENST00000531489 886 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN1O95832 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 OR6C73P-201ENST00000546432 358 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.16□□□□□ -1.9
CLDN1O95832 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC090615.1-201ENST00000577519 154 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN1O95832 MIR4672-201ENST00000583126 81 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC078795.2-201ENST00000602835 1252 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC091965.4-201ENST00000607691 587 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AP000254.1-201ENST00000609934 520 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC104073.3-201ENST00000610942 955 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC006329.2-201ENST00000611491 394 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC013562.2-201ENST00000611632 603 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC027807.2-201ENST00000616099 408 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC091925.2-201ENST00000625059 256 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 AC099654.13-201ENST00000639774 207 ntBASIC3.16□□□□□ -1.9
CLDN1O95832 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.16□□□□□ -1.9
CLDN1O95832 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CLDN1O95832 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms