Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC010678.1-201ENST00000614118 713 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 AC009509.4-201ENST00000619202 509 ntBASIC3.42□□□□□ -1.86
CACNA1FO60840 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.41□□□□□ -1.86
CACNA1FO60840 ZNF33CP-201ENST00000432492 2030 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC005832.2-201ENST00000538921 1430 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CACNA1FO60840 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC095050.2-201ENST00000510748 1458 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CACNA1FO60840 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 RNU6-666P-201ENST00000363499 107 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 RNU6-452P-201ENST00000384406 107 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 MIR181B1-201ENST00000385240 110 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.41□□□□□ -1.86
CACNA1FO60840 RPL23AP39-201ENST00000415533 405 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 RPL31P45-201ENST00000419532 356 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1FO60840 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1FO60840 USP9YP36-201ENST00000424581 829 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.41□□□□□ -1.86
CACNA1FO60840 USP9YP31-201ENST00000431405 881 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.41□□□□□ -1.86
CACNA1FO60840 GTF2IP7-202ENST00000436677 309 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.41□□□□□ -1.86
CACNA1FO60840 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1FO60840 HMGB1P25-201ENST00000468402 607 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 RN7SL432P-201ENST00000484057 298 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.41□□□□□ -1.86
CACNA1FO60840 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 RPL37P25-201ENST00000507308 276 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 POU5F1P7-201ENST00000508759 541 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC091965.2-201ENST00000512324 613 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC116347.2-201ENST00000514912 523 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 OR8L1P-201ENST00000534005 955 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC008083.2-201ENST00000546707 476 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.41□□□□□ -1.86
CACNA1FO60840 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.41□□□□□ -1.86
CACNA1FO60840 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.41□□□□□ -1.86
CACNA1FO60840 U73023.1-201ENST00000603134 700 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 AC025048.6-202ENST00000627667 438 ntBASIC3.41□□□□□ -1.86
CACNA1FO60840 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
CACNA1FO60840 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CACNA1FO60840 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CACNA1FO60840 AL672167.1-206ENST00000356293 943 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CACNA1FO60840 SNORA5B-201ENST00000363786 132 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 SNORD65.1-201ENST00000390889 71 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 UBE2V1P2-201ENST00000397758 440 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AL161449.1-201ENST00000414531 1199 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.4□□□□□ -1.86
CACNA1FO60840 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
CACNA1FO60840 MTATP6P13-201ENST00000438531 667 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 CBX1P4-201ENST00000439415 457 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 MTND4P18-201ENST00000447010 465 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.4□□□□□ -1.86
CACNA1FO60840 RPS3P1-201ENST00000456781 192 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.4□□□□□ -1.86
CACNA1FO60840 AP000926.1-201ENST00000479573 241 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 RPL9P33-201ENST00000484311 566 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 CDC42P4-201ENST00000510507 563 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.4□□□□□ -1.86
CACNA1FO60840 AC087808.1-201ENST00000520501 361 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 IGJP1-201ENST00000522682 475 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.4□□□□□ -1.86
CACNA1FO60840 AL389895.1-201ENST00000554127 252 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.4□□□□□ -1.86
CACNA1FO60840 AC136619.2-201ENST00000563361 631 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AP005205.1-201ENST00000563503 508 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 PCMTD1P2-201ENST00000565017 355 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AC083899.3-201ENST00000603413 594 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CACNA1FO60840 AC068276.1-201ENST00000605793 379 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AC106028.5-201ENST00000610332 395 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 AC099063.3-201ENST00000642066 185 ntBASIC3.4□□□□□ -1.86
CACNA1FO60840 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.87
CACNA1FO60840 Z99496.1-201ENST00000469424 1477 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.4□□□□□ -1.87
CACNA1FO60840 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CACNA1FO60840 XGY1-201ENST00000381172 446 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 RNU6-185P-201ENST00000384421 107 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 RNU6-253P-201ENST00000384730 105 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.4□□□□□ -1.87
CACNA1FO60840 AL138785.1-201ENST00000425821 331 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 Z93242.1-201ENST00000427102 353 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 RPL23AP74-201ENST00000437246 471 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 SSXP1-201ENST00000453640 473 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC008481.1-201ENST00000463278 396 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC126182.1-201ENST00000478134 357 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC138853.1-201ENST00000503549 823 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 ARL2BPP4-201ENST00000506854 471 ntBASIC3.4□□□□□ -1.87
CACNA1FO60840 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms