Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AMZ2P1-203ENST00000565833 850 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 FKBP1AP1-201ENST00000594588 318 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC004852.3-201ENST00000614131 326 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR6071-201ENST00000616741 78 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 STX3-208ENST00000641815 3236 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC090971.4-201ENST00000560291 1800 ntBASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHGA11Q9Y5H2 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AC006206.1-201ENST00000544842 3387 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 PABPC1P6-201ENST00000445594 1829 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 SNORA64.1-201ENST00000362600 132 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 MIR521-1-201ENST00000384902 87 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AL445665.1-202ENST00000452436 324 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 HLA-DPA3-207ENST00000454398 229 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 LINC01399-202ENST00000458450 244 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 HSPE1P6-201ENST00000479457 291 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 HMGN1P11-201ENST00000508668 303 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AC007016.1-201ENST00000512110 244 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 RNU6-138P-201ENST00000515952 107 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AC109329.1-201ENST00000518744 317 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 TRAV37-201ENST00000553906 342 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AL157871.3-201ENST00000557231 293 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AC022884.2-201ENST00000578535 580 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AL158827.2-201ENST00000602494 330 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AL139124.1-201ENST00000609123 421 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 AL691447.3-201ENST00000635020 330 ntBASIC5.4□□□□□ -1.54
PCDHGA11Q9Y5H2 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA11Q9Y5H2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHGA11Q9Y5H2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHGA11Q9Y5H2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHGA11Q9Y5H2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PCDHGA11Q9Y5H2 AL360270.2-201ENST00000562952 5985 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AL022311.1-201ENST00000623726 19416 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC092376.2-201ENST00000622621 4116 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 Y_RNA.33-201ENST00000362591 102 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU5A-1-201ENST00000362698 116 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU1-76P-201ENST00000362903 159 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-595P-201ENST00000363944 107 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-1317P-201ENST00000364582 104 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU6-1074P-201ENST00000383995 104 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 PPIAP9-201ENST00000403866 498 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RNU4-34P-201ENST00000410431 124 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC004938.1-201ENST00000438468 308 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC009963.2-201ENST00000453431 138 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC083899.1-201ENST00000454465 3819 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 RPS23P6-201ENST00000466136 431 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 AC022493.1-201ENST00000492984 337 ntBASIC5.39□□□□□ -1.55
PCDHGA11Q9Y5H2 SUMO2P6-201ENST00000505273 288 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms