Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AC022905.1-201ENST00000503430 3048 ntBASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MS4A3Q96HJ5 AP003486.1-201ENST00000525716 3994 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 SNORD56.1-201ENST00000362913 68 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AL078599.1-201ENST00000402075 293 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 RN7SKP137-201ENST00000411074 307 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 RN7SKP101-201ENST00000411376 320 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 RPL23AP62-201ENST00000463396 453 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 RNU6-1299P-201ENST00000516316 100 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 SCARNA15.2-201ENST00000516409 127 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 MIR5009-201ENST00000578736 100 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 RN7SL131P-201ENST00000579043 256 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 RN7SL356P-201ENST00000582228 248 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AC025754.2-201ENST00000606491 432 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 IGLL4P-201ENST00000614590 133 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AL591848.4-201ENST00000567832 3472 ntBASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
MS4A3Q96HJ5 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 ASNSP1-201ENST00000518311 1939 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 TATDN2P3-201ENST00000452855 3665 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RN7SKP55-201ENST00000364888 307 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP302-201ENST00000364896 100 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RNU6-497P-201ENST00000365316 104 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RNU6-787P-201ENST00000384032 107 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RNU6-24P-201ENST00000384440 107 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 MIR544A-201ENST00000384855 91 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 MIR549A-201ENST00000385268 96 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 MIR891A-201ENST00000401237 79 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AC244670.1-201ENST00000436879 112 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RPL7AP30-201ENST00000482859 796 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RPL30P5-201ENST00000494923 336 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 SNORA70.12-201ENST00000516084 153 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RNU6-904P-201ENST00000516206 101 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 RNA5SP75-201ENST00000516841 111 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 HMGN2P36-201ENST00000529541 409 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 MIR4800-201ENST00000537353 80 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 MIR3135A-201ENST00000578460 77 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AC020895.1-201ENST00000595362 272 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AL161420.1-201ENST00000619393 264 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 AC087894.3-201ENST00000623682 349 ntBASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
MS4A3Q96HJ5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
MS4A3Q96HJ5 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
MS4A3Q96HJ5 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.15□□□□□ -1.43
MS4A3Q96HJ5 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.15□□□□□ -1.43
MS4A3Q96HJ5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms