Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 SUPT4H1P2-201ENST00000501248 353 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 HMGB1P35-201ENST00000503360 598 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC106774.3-201ENST00000505444 169 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 FAM197Y9-203ENST00000505707 345 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 ARHGEF38-IT1-201ENST00000512262 456 ntTSL 3 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 RPL39P5-202ENST00000512505 151 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 RNU4-49P-201ENST00000516080 140 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 SNORA48.11-201ENST00000517015 89 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 FAM181A-AS1-204ENST00000556290 526 ntTSL 4 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC021231.3-201ENST00000558497 370 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC096996.1-201ENST00000563813 325 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC136944.3-202ENST00000567422 509 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC004232.1-201ENST00000571388 208 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC006441.2-201ENST00000580084 302 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 MIR4754-201ENST00000582477 89 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 HMGN1P31-201ENST00000590085 304 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 OR5AH1P-201ENST00000595968 283 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 RBM11P1-201ENST00000604951 799 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 MME-218ENST00000625667 363 ntTSL 5 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SVIPQ8NHG7 AC008264.2-201ENST00000610193 3731 ntBASIC3.02□□□□□ -1.93
SVIPQ8NHG7 MCOLN3-203ENST00000370589 2756 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SAMD3-201ENST00000324172 993 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RNU6-805P-201ENST00000365643 106 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RNU6-1032P-201ENST00000384100 107 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RNU1-46P-201ENST00000384425 164 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SNORA66-201ENST00000384792 133 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 Metazoa_SRP.7-201ENST00000392674 281 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AL590762.2-201ENST00000395798 571 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 UBA52P6-201ENST00000399822 382 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AL355864.1-201ENST00000401937 526 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RN7SKP158-201ENST00000410453 326 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC007064.1-201ENST00000412238 351 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC018804.1-201ENST00000430381 618 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 NKAIN1P1-201ENST00000435754 582 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SPTLC1P4-201ENST00000435997 260 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 PGAM3P-201ENST00000437662 427 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AL353572.1-201ENST00000442490 417 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 PRDX1P1-201ENST00000449329 596 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 MRPL51P2-201ENST00000450190 376 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 IGKV1-37-201ENST00000465170 398 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RPS4XP22-201ENST00000480755 780 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC022447.5-201ENST00000504817 392 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC110768.2-201ENST00000506540 329 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 IGKV1D-37-201ENST00000509129 353 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RNU1-104P-201ENST00000517280 175 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC107953.1-201ENST00000522216 297 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 RAB2A-208ENST00000529579 680 ntTSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SAA3P-202ENST00000534768 642 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 KRT16P1-202ENST00000577750 679 ntTSL 3 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 MIR3942-201ENST00000585264 109 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC027612.4-201ENST00000605371 583 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AL031587.4-201ENST00000609265 691 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 FP236240.4-201ENST00000624353 373 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 AC005943.2-201ENST00000624421 148 ntBASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SPDL1-216ENST00000629457 340 ntTSL 5 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SVIPQ8NHG7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SVIPQ8NHG7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SVIPQ8NHG7 MAPK10-266ENST00000641066 6555 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 CBX3P1-201ENST00000325243 554 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 Y_RNA.160-201ENST00000363677 92 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC3□□□□□ -1.93
SVIPQ8NHG7 MIR95-201ENST00000385072 81 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SVIPQ8NHG7 RN7SKP144-201ENST00000411108 279 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 HMGB3P2-201ENST00000411913 584 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC3□□□□□ -1.93
SVIPQ8NHG7 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC3□□□□□ -1.93
SVIPQ8NHG7 RPL30P16-201ENST00000419341 429 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 CKS1BP6-201ENST00000424932 240 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3□□□□□ -1.93
SVIPQ8NHG7 AC099066.3-201ENST00000434499 301 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3□□□□□ -1.93
SVIPQ8NHG7 AC122718.1-201ENST00000439448 744 ntBASIC3□□□□□ -1.93
SVIPQ8NHG7 AC009238.1-201ENST00000442165 424 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 240.8 ms