Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC243654.2-201ENST00000612843 443 ntBASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 EXOC5P1-201ENST00000510543 1969 ntBASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 AL592148.3-201ENST00000608771 2646 ntBASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXR1Q6PIV2 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 IRF5P1-201ENST00000504852 2164 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC015813.6-201ENST00000624409 5808 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AL353796.1-201ENST00000561542 3241 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 XIAPP3-201ENST00000312918 795 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 SNORD82-201ENST00000365530 70 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 U3.42-201ENST00000408746 214 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC096920.1-201ENST00000423991 241 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 TMEM183AP1-205ENST00000432739 290 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC100832.1-201ENST00000471945 383 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 RPS17P15-201ENST00000475609 349 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 RPS23P1-201ENST00000491662 432 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC135721.1-201ENST00000497954 479 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 Y_RNA.687-201ENST00000516558 91 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 RAB9BP1-201ENST00000519581 626 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 RN7SL435P-201ENST00000584418 282 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC118658.2-201ENST00000618697 459 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 CR392039.4-201ENST00000624968 501 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 AC007842.1-201ENST00000597336 2039 ntBASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
FOXR1Q6PIV2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 MIR411-201ENST00000362239 96 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 RNA5SP319-201ENST00000362768 119 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 MIR1286-201ENST00000408112 78 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 RN7SL51P-201ENST00000468230 285 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AC069499.1-201ENST00000489433 509 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 RN7SL591P-201ENST00000496150 292 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 RNU7-200P-201ENST00000516105 62 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 MIR6798-201ENST00000612887 67 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AC241377.1-201ENST00000619797 406 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 MIR8080-201ENST00000622224 89 ntBASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
FOXR1Q6PIV2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 ZNF285B-201ENST00000561698 1767 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AP000560.1-201ENST00000624150 1937 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 RNU6-1329P-201ENST00000365664 107 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 RNY1P5-201ENST00000383890 115 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 RNU6-1293P-201ENST00000384077 107 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 MIR625-201ENST00000385047 85 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AL078599.1-201ENST00000402075 293 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 UBE2V1P4-201ENST00000425374 344 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 BTF3P6-201ENST00000448054 499 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AC005912.1-201ENST00000495392 255 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AC008953.1-201ENST00000497334 318 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 AC006499.3-201ENST00000506077 748 ntBASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.53□□□□□ -1.52
FOXR1Q6PIV2 SNORA31.6-201ENST00000516241 130 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms