Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 RNU6-775P-201ENST00000459318 96 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC5Q00444 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXC5Q00444 RNA5SP24-201ENST00000516478 95 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 RN7SKP40-201ENST00000517211 242 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXC5Q00444 MTCO1P47-201ENST00000523889 1271 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 SUB1P1-201ENST00000524415 382 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC5Q00444 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC5Q00444 MIR3609-201ENST00000582661 80 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 AP002826.1-201ENST00000608835 315 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC5Q00444 AC009159.1-201ENST00000618386 642 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXC5Q00444 CTSLP2-204ENST00000629029 392 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 AC008432.1-201ENST00000615912 1320 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 SGO1P1-201ENST00000603525 1447 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC5Q00444 MAPK10-266ENST00000641066 6555 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 AC135776.4-201ENST00000624300 1904 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
HOXC5Q00444 AC099654.7-201ENST00000635788 2127 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXC5Q00444 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
HOXC5Q00444 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXC5Q00444 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
HOXC5Q00444 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HOXC5Q00444 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
HOXC5Q00444 RNU6-198P-201ENST00000384258 104 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 RNU6-882P-201ENST00000391025 103 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
HOXC5Q00444 AC016769.3-201ENST00000396562 315 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AL355615.1-201ENST00000406187 641 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AL133384.1-201ENST00000412744 351 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXC5Q00444 AC246680.2-201ENST00000422106 389 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AC005345.1-201ENST00000431868 217 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXC5Q00444 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC5Q00444 AC011753.1-201ENST00000451001 220 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXC5Q00444 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC5Q00444 snoU109.4-201ENST00000458953 143 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXC5Q00444 CDC42P4-201ENST00000510507 563 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.04□□□□□ -2.08
HOXC5Q00444 AC022784.5-201ENST00000522241 437 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.04□□□□□ -2.08
HOXC5Q00444 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.04□□□□□ -2.08
HOXC5Q00444 LRRC37A5P-203ENST00000580181 585 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 AC104307.1-201ENST00000616142 196 ntBASIC2.04□□□□□ -2.08
HOXC5Q00444 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXC5Q00444 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
HOXC5Q00444 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
HOXC5Q00444 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXC5Q00444 RNU6-619P-201ENST00000365146 108 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 SNORA51.6-201ENST00000384151 125 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 MIR627-201ENST00000384979 97 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 SNORD65C-201ENST00000390962 71 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AL139098.1-201ENST00000407291 389 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 HMGB1P11-201ENST00000413899 637 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 FCF1P2-201ENST00000415284 583 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AC009414.1-201ENST00000427200 443 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXC5Q00444 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXC5Q00444 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXC5Q00444 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.03□□□□□ -2.08
HOXC5Q00444 Z82190.1-201ENST00000454534 490 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXC5Q00444 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 snoU13.28-201ENST00000459235 104 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 OR52A4P-202ENST00000481634 799 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.03□□□□□ -2.08
HOXC5Q00444 AC084024.2-201ENST00000503480 791 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AC048346.1-201ENST00000510247 144 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 RNU1-103P-201ENST00000516502 125 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 RNU6-885P-201ENST00000516607 104 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AC087808.1-201ENST00000520501 361 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.03□□□□□ -2.08
HOXC5Q00444 MIR3162-201ENST00000581818 82 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 RN7SL622P-201ENST00000585292 275 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.03□□□□□ -2.08
HOXC5Q00444 AP000254.1-201ENST00000609934 520 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AL161629.2-201ENST00000615347 275 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 AC025034.2-201ENST00000623264 286 ntBASIC2.03□□□□□ -2.08
HOXC5Q00444 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
HOXC5Q00444 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
HOXC5Q00444 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.03□□□□□ -2.08
HOXC5Q00444 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXC5Q00444 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC5Q00444 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC5Q00444 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXC5Q00444 RNU6-301P-201ENST00000384277 107 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 SNORD51-201ENST00000384320 80 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 SNORA67.4-201ENST00000384688 142 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 RNU6-1197P-201ENST00000391183 107 ntBASIC2.02□□□□□ -2.09
HOXC5Q00444 RNU2-15P-201ENST00000410692 191 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms