Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
XPAP23025 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.41□□□□□ -1.7
XPAP23025 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.41□□□□□ -1.7
XPAP23025 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.41□□□□□ -1.7
XPAP23025 AC010591.1-201ENST00000603941 649 ntBASIC4.41□□□□□ -1.7
XPAP23025 Z98200.1-201ENST00000607298 470 ntBASIC4.41□□□□□ -1.7
XPAP23025 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.41□□□□□ -1.7
XPAP23025 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
XPAP23025 MIR6830-201ENST00000636015 70 ntBASIC4.41□□□□□ -1.7
XPAP23025 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.41□□□□□ -1.7
XPAP23025 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.41□□□□□ -1.7
XPAP23025 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.41□□□□□ -1.7
XPAP23025 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.41□□□□□ -1.7
XPAP23025 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
XPAP23025 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
XPAP23025 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
XPAP23025 ASNSP3-201ENST00000451989 1306 ntBASIC4.41□□□□□ -1.7
XPAP23025 MTCO1P9-201ENST00000505577 1534 ntBASIC4.41□□□□□ -1.7
XPAP23025 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
XPAP23025 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.4□□□□□ -1.7
XPAP23025 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
XPAP23025 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.7
XPAP23025 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.4□□□□□ -1.7
XPAP23025 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.4□□□□□ -1.7
XPAP23025 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
XPAP23025 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
XPAP23025 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
XPAP23025 OR4G1P-203ENST00000641984 1631 ntBASIC4.4□□□□□ -1.7
XPAP23025 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.4□□□□□ -1.7
XPAP23025 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
XPAP23025 RNU4-73P-201ENST00000363164 141 ntBASIC4.4□□□□□ -1.71
XPAP23025 SNORD81.2-201ENST00000365153 76 ntBASIC4.4□□□□□ -1.71
XPAP23025 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 MIR135A2-201ENST00000384854 100 ntBASIC4.4□□□□□ -1.71
XPAP23025 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
XPAP23025 UBE2V1P2-201ENST00000397758 440 ntBASIC4.4□□□□□ -1.71
XPAP23025 AL136372.1-201ENST00000403060 228 ntBASIC4.4□□□□□ -1.71
XPAP23025 SNORA11F-201ENST00000408237 128 ntBASIC4.4□□□□□ -1.71
XPAP23025 RNU2-39P-201ENST00000410604 198 ntBASIC4.4□□□□□ -1.71
XPAP23025 RN7SKP263-201ENST00000411194 309 ntBASIC4.4□□□□□ -1.71
XPAP23025 RNU6-373P-201ENST00000411247 98 ntBASIC4.4□□□□□ -1.71
XPAP23025 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 RPL23AP38-201ENST00000423801 469 ntBASIC4.4□□□□□ -1.71
XPAP23025 MTND1P14-201ENST00000427400 950 ntBASIC4.4□□□□□ -1.71
XPAP23025 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.4□□□□□ -1.71
XPAP23025 CBWD4P-201ENST00000445695 655 ntBASIC4.4□□□□□ -1.71
XPAP23025 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
XPAP23025 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
XPAP23025 AC005008.1-201ENST00000456151 612 ntBASIC4.4□□□□□ -1.71
XPAP23025 snoU13.3-201ENST00000459441 104 ntBASIC4.4□□□□□ -1.71
XPAP23025 RPL7AP28-201ENST00000464513 571 ntBASIC4.4□□□□□ -1.71
XPAP23025 MRPS17P3-201ENST00000465453 385 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC126389.1-201ENST00000477436 290 ntBASIC4.4□□□□□ -1.71
XPAP23025 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC116562.3-201ENST00000506136 177 ntBASIC4.4□□□□□ -1.71
XPAP23025 RNU7-51P-201ENST00000516560 62 ntBASIC4.4□□□□□ -1.71
XPAP23025 RN7SKP219-201ENST00000516825 296 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.4□□□□□ -1.71
XPAP23025 NARSP2-201ENST00000518524 679 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 AC068587.5-201ENST00000528506 175 ntBASIC4.4□□□□□ -1.71
XPAP23025 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 CBX3P7-201ENST00000532876 502 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.4□□□□□ -1.71
XPAP23025 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.4□□□□□ -1.71
XPAP23025 AC135001.1-201ENST00000544546 283 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 PARP1P2-201ENST00000556806 195 ntBASIC4.4□□□□□ -1.71
XPAP23025 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
XPAP23025 RPS3AP23-202ENST00000574601 686 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC006270.2-201ENST00000578523 652 ntBASIC4.4□□□□□ -1.71
XPAP23025 MIR4775-201ENST00000581168 75 ntBASIC4.4□□□□□ -1.71
XPAP23025 MIR4697-201ENST00000582977 78 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC010928.3-201ENST00000587712 541 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.4□□□□□ -1.71
XPAP23025 AL160290.3-201ENST00000604869 165 ntBASIC4.4□□□□□ -1.71
XPAP23025 SNORD91B-202ENST00000608459 222 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC114781.5-201ENST00000615297 108 ntBASIC4.4□□□□□ -1.71
XPAP23025 AL136221.1-201ENST00000621449 509 ntBASIC4.4□□□□□ -1.71
XPAP23025 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
XPAP23025 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.4□□□□□ -1.71
XPAP23025 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.4□□□□□ -1.71
XPAP23025 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
XPAP23025 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
XPAP23025 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
XPAP23025 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
XPAP23025 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.4□□□□□ -1.71
XPAP23025 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
XPAP23025 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
XPAP23025 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.39□□□□□ -1.71
XPAP23025 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
XPAP23025 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
XPAP23025 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
XPAP23025 RNA5SP307-201ENST00000362863 116 ntBASIC4.39□□□□□ -1.71
XPAP23025 RNU6-1249P-201ENST00000363237 111 ntBASIC4.39□□□□□ -1.71
XPAP23025 RNA5SP189-201ENST00000364920 115 ntBASIC4.39□□□□□ -1.71
XPAP23025 RNU5E-6P-201ENST00000365574 115 ntBASIC4.39□□□□□ -1.71
XPAP23025 RNU4-20P-201ENST00000365601 151 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms