Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CCNG2P1-201ENST00000549521 1000 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.78□□□□□ -1.8
RTN3O95197 AC008088.1-201ENST00000580993 280 ntBASIC3.78□□□□□ -1.8
RTN3O95197 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN3O95197 AC092354.1-201ENST00000606057 376 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AP003355.3-201ENST00000623465 114 ntBASIC3.78□□□□□ -1.8
RTN3O95197 AC007494.3-201ENST00000624660 743 ntBASIC3.78□□□□□ -1.8
RTN3O95197 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RTN3O95197 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN3O95197 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.78□□□□□ -1.8
RTN3O95197 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
RTN3O95197 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN3O95197 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.78□□□□□ -1.8
RTN3O95197 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN3O95197 MFSD8-236ENST00000641509 4050 ntBASIC3.78□□□□□ -1.8
RTN3O95197 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTN3O95197 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
RTN3O95197 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 SDAD1P2-201ENST00000441308 2028 ntBASIC3.77□□□□□ -1.81
RTN3O95197 RNU6-223P-201ENST00000362830 107 ntBASIC3.77□□□□□ -1.81
RTN3O95197 RNU5F-6P-201ENST00000362979 116 ntBASIC3.77□□□□□ -1.81
RTN3O95197 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 SKINT1L-201ENST00000401057 817 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 UBE2D3P2-201ENST00000424409 445 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.77□□□□□ -1.81
RTN3O95197 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.77□□□□□ -1.81
RTN3O95197 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 AC073063.1-201ENST00000434352 607 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 GDI2P2-201ENST00000445131 608 ntBASIC3.77□□□□□ -1.81
RTN3O95197 MRPS31P2-201ENST00000451581 518 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 MTCO1P42-201ENST00000457379 726 ntBASIC3.77□□□□□ -1.81
RTN3O95197 RPS3AP43-201ENST00000479743 781 ntBASIC3.77□□□□□ -1.81
RTN3O95197 RPL23AP41-201ENST00000484754 458 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 PCBP2P3-201ENST00000509726 843 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.77□□□□□ -1.81
RTN3O95197 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.77□□□□□ -1.81
RTN3O95197 MIR3915-201ENST00000578518 97 ntBASIC3.77□□□□□ -1.81
RTN3O95197 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 KLKP1-201ENST00000595979 403 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC068790.3-201ENST00000602988 553 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AL109653.1-201ENST00000603091 248 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC006077.1-201ENST00000604746 343 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC004908.2-201ENST00000609090 574 ntBASIC3.77□□□□□ -1.81
RTN3O95197 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.77□□□□□ -1.81
RTN3O95197 AL603758.1-201ENST00000618654 241 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC012150.2-201ENST00000621300 544 ntBASIC3.77□□□□□ -1.81
RTN3O95197 AC093591.3-201ENST00000634516 308 ntBASIC3.77□□□□□ -1.81
RTN3O95197 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.77□□□□□ -1.81
RTN3O95197 AC007496.3-201ENST00000624987 3443 ntBASIC3.77□□□□□ -1.81
RTN3O95197 PABPC1P9-201ENST00000426076 1612 ntBASIC3.77□□□□□ -1.81
RTN3O95197 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTN3O95197 AC118273.1-201ENST00000525324 3006 ntBASIC3.76□□□□□ -1.81
RTN3O95197 ZNF807-201ENST00000328088 1707 ntBASIC3.76□□□□□ -1.81
RTN3O95197 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.76□□□□□ -1.81
RTN3O95197 AL138713.1-201ENST00000624026 2130 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AL136164.4-201ENST00000625013 2135 ntBASIC3.76□□□□□ -1.81
RTN3O95197 RNU5F-7P-201ENST00000363696 115 ntBASIC3.76□□□□□ -1.81
RTN3O95197 MIR493-201ENST00000385254 89 ntBASIC3.76□□□□□ -1.81
RTN3O95197 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RTN3O95197 SNORA11.2-201ENST00000408318 127 ntBASIC3.76□□□□□ -1.81
RTN3O95197 U3.42-201ENST00000408746 214 ntBASIC3.76□□□□□ -1.81
RTN3O95197 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
RTN3O95197 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.76□□□□□ -1.81
RTN3O95197 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.76□□□□□ -1.81
RTN3O95197 BMI1P1-201ENST00000445879 941 ntBASIC3.76□□□□□ -1.81
RTN3O95197 RPL36AP33-201ENST00000450395 310 ntBASIC3.76□□□□□ -1.81
RTN3O95197 BET1P1-201ENST00000482276 359 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AC109486.1-201ENST00000486833 374 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AC135721.1-201ENST00000497954 479 ntBASIC3.76□□□□□ -1.81
RTN3O95197 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 RNU6-1003P-201ENST00000517099 105 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 MTND4LP18-201ENST00000526864 291 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AP000907.2-201ENST00000530827 353 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RTN3O95197 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.76□□□□□ -1.81
RTN3O95197 MIR3922-201ENST00000585192 84 ntBASIC3.76□□□□□ -1.81
RTN3O95197 CLIC4P2-201ENST00000601934 717 ntBASIC3.76□□□□□ -1.81
RTN3O95197 OR10AB1P-201ENST00000609613 938 ntBASIC3.76□□□□□ -1.81
RTN3O95197 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.76□□□□□ -1.81
RTN3O95197 AC093838.1-201ENST00000613014 469 ntBASIC3.76□□□□□ -1.81
RTN3O95197 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.76□□□□□ -1.81
RTN3O95197 AC084757.4-201ENST00000616350 526 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AC091931.1-201ENST00000623488 728 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AC112204.3-201ENST00000623822 332 ntBASIC3.76□□□□□ -1.81
RTN3O95197 AL392088.2-201ENST00000637607 285 ntBASIC3.76□□□□□ -1.81
RTN3O95197 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms