Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC245128.3-201ENST00000594721 748 ntBASIC2.9□□□□□ -1.95
PCF11O94913 uc_338.5-201ENST00000611839 155 ntBASIC2.9□□□□□ -1.95
PCF11O94913 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.9□□□□□ -1.95
PCF11O94913 MIR6734-201ENST00000621166 68 ntBASIC2.9□□□□□ -1.95
PCF11O94913 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCF11O94913 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PCF11O94913 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCF11O94913 AC005336.3-201ENST00000623833 2679 ntBASIC2.89□□□□□ -1.95
PCF11O94913 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PCF11O94913 RNU6-244P-201ENST00000391028 104 ntBASIC2.89□□□□□ -1.95
PCF11O94913 RPL26P37-201ENST00000411983 438 ntBASIC2.89□□□□□ -1.95
PCF11O94913 EIF1AXP1-201ENST00000419267 435 ntBASIC2.89□□□□□ -1.95
PCF11O94913 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.89□□□□□ -1.95
PCF11O94913 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.89□□□□□ -1.95
PCF11O94913 KPNA2P1-201ENST00000458289 1591 ntBASIC2.89□□□□□ -1.95
PCF11O94913 RNA5SP102-201ENST00000516865 106 ntBASIC2.89□□□□□ -1.95
PCF11O94913 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.89□□□□□ -1.95
PCF11O94913 AL078603.1-201ENST00000603824 313 ntBASIC2.89□□□□□ -1.95
PCF11O94913 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
PCF11O94913 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PCF11O94913 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
PCF11O94913 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.88□□□□□ -1.95
PCF11O94913 AL391987.6-201ENST00000305671 199 ntBASIC2.88□□□□□ -1.95
PCF11O94913 RNA5SP391-201ENST00000363456 119 ntBASIC2.88□□□□□ -1.95
PCF11O94913 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.88□□□□□ -1.95
PCF11O94913 AL138880.1-201ENST00000405824 642 ntBASIC2.88□□□□□ -1.95
PCF11O94913 HSPE1P28-201ENST00000443139 211 ntBASIC2.88□□□□□ -1.95
PCF11O94913 AC007395.1-201ENST00000451333 677 ntBASIC2.88□□□□□ -1.95
PCF11O94913 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.88□□□□□ -1.95
PCF11O94913 BX322784.1-201ENST00000455793 1077 ntBASIC2.88□□□□□ -1.95
PCF11O94913 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
PCF11O94913 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.88□□□□□ -1.95
PCF11O94913 RPL7P46-201ENST00000425129 740 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.87□□□□□ -1.95
PCF11O94913 RPL21P66-201ENST00000426566 466 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC087190.1-201ENST00000484462 480 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC011352.3-201ENST00000505162 593 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC117525.1-201ENST00000515228 503 ntBASIC2.87□□□□□ -1.95
PCF11O94913 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.87□□□□□ -1.95
PCF11O94913 RNU6-1308P-201ENST00000516817 103 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AP003717.3-201ENST00000544832 1180 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AL049870.4-201ENST00000555741 486 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.87□□□□□ -1.95
PCF11O94913 Z82209.1-201ENST00000422141 2135 ntBASIC2.87□□□□□ -1.95
PCF11O94913 RPL17P49-201ENST00000443728 411 ntBASIC2.87□□□□□ -1.95
PCF11O94913 HMGB1P26-201ENST00000452520 628 ntBASIC2.87□□□□□ -1.95
PCF11O94913 RNU1-123P-201ENST00000458950 160 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC109486.1-201ENST00000486833 374 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.87□□□□□ -1.95
PCF11O94913 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.87□□□□□ -1.95
PCF11O94913 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.87□□□□□ -1.95
PCF11O94913 AL133393.1-201ENST00000603277 287 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AC009950.2-201ENST00000636548 183 ntBASIC2.87□□□□□ -1.95
PCF11O94913 AP000553.5-201ENST00000641933 54 ntBASIC2.87□□□□□ -1.95
PCF11O94913 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCF11O94913 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
PCF11O94913 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCF11O94913 Y_RNA.354-201ENST00000365448 111 ntBASIC2.86□□□□□ -1.95
PCF11O94913 SET-203ENST00000372688 801 ntTSL 2 BASIC2.86□□□□□ -1.95
PCF11O94913 RNU2-17P-201ENST00000410290 190 ntBASIC2.86□□□□□ -1.95
PCF11O94913 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.86□□□□□ -1.95
PCF11O94913 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.86□□□□□ -1.95
PCF11O94913 RPL7P37-201ENST00000425095 738 ntBASIC2.86□□□□□ -1.95
PCF11O94913 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.86□□□□□ -1.95
PCF11O94913 AL392003.1-201ENST00000434394 243 ntBASIC2.86□□□□□ -1.95
PCF11O94913 SSXP4-201ENST00000451349 245 ntBASIC2.86□□□□□ -1.95
PCF11O94913 AC096992.1-201ENST00000459808 709 ntBASIC2.86□□□□□ -1.95
PCF11O94913 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.86□□□□□ -1.95
PCF11O94913 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
PCF11O94913 RNU6-250P-201ENST00000516958 103 ntBASIC2.86□□□□□ -1.95
PCF11O94913 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
PCF11O94913 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.86□□□□□ -1.95
PCF11O94913 ZNF92P3-201ENST00000596594 954 ntBASIC2.86□□□□□ -1.95
PCF11O94913 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PCF11O94913 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCF11O94913 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCF11O94913 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.85□□□□□ -1.95
PCF11O94913 Y_RNA.178-201ENST00000363832 102 ntBASIC2.85□□□□□ -1.95
PCF11O94913 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCF11O94913 AL035405.1-201ENST00000400795 710 ntBASIC2.85□□□□□ -1.95
PCF11O94913 MIR1250-201ENST00000408098 113 ntBASIC2.85□□□□□ -1.95
PCF11O94913 RNU4-65P-201ENST00000410473 140 ntBASIC2.85□□□□□ -1.95
PCF11O94913 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.85□□□□□ -1.95
PCF11O94913 NDUFA5P10-201ENST00000432147 357 ntBASIC2.85□□□□□ -1.95
PCF11O94913 OR7L1P-201ENST00000456181 380 ntBASIC2.85□□□□□ -1.95
PCF11O94913 AC079804.2-201ENST00000490376 200 ntBASIC2.85□□□□□ -1.95
PCF11O94913 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.85□□□□□ -1.95
PCF11O94913 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.85□□□□□ -1.95
PCF11O94913 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.85□□□□□ -1.95
PCF11O94913 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.85□□□□□ -1.95
PCF11O94913 AP001350.1-201ENST00000601906 1524 ntBASIC2.84□□□□□ -1.95
PCF11O94913 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PCF11O94913 RNA5SP138-201ENST00000365098 114 ntBASIC2.84□□□□□ -1.95
PCF11O94913 RNU6-1181P-201ENST00000384191 106 ntBASIC2.84□□□□□ -1.95
PCF11O94913 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCF11O94913 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.84□□□□□ -1.95
PCF11O94913 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.84□□□□□ -1.95
PCF11O94913 RPL23AP20-201ENST00000447965 421 ntBASIC2.84□□□□□ -1.95
PCF11O94913 CDC42P1-201ENST00000456658 548 ntBASIC2.84□□□□□ -1.95
PCF11O94913 AC021087.2-201ENST00000504656 1203 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms