Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL139276.1-201ENST00000311910 1001 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU5A-1-201ENST00000362698 116 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-1287P-201ENST00000362914 107 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 SNORA62-201ENST00000365493 153 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-1060P-201ENST00000384664 107 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL606923.1-201ENST00000406616 190 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-193P-201ENST00000410977 107 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 TMSB10P2-201ENST00000416049 131 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 CBWD4P-201ENST00000445695 655 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 TPT1P12-201ENST00000448968 492 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC012671.1-201ENST00000451912 203 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 MTND3P16-201ENST00000452205 344 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC079804.1-201ENST00000461922 436 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP000852.1-201ENST00000472460 573 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RN7SL860P-201ENST00000473738 223 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 HSPE1P6-201ENST00000479457 291 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC078817.1-201ENST00000492623 435 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RBBP4P6-201ENST00000508098 202 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 MTCO1P35-201ENST00000515270 228 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNA5SP497-201ENST00000516081 97 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 IGKV2D-23-201ENST00000518179 286 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 NARSP2-201ENST00000518524 679 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL157700.1-201ENST00000561973 1432 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC018638.8-201ENST00000588755 281 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC011712.1-201ENST00000588959 234 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC067852.3-201ENST00000589177 561 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL158032.1-201ENST00000605401 106 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC091979.2-201ENST00000607514 214 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 MIR6798-201ENST00000612887 67 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP001486.3-201ENST00000615334 372 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP001350.1-201ENST00000601906 1524 ntBASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC126755.2-208ENST00000327792 462 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC138969.1-213ENST00000331436 462 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 Y_RNA.72-201ENST00000362894 103 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNA5SP509-201ENST00000364577 119 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU4-66P-201ENST00000365199 138 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-1009P-201ENST00000390996 107 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL162578.1-201ENST00000406202 378 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU4-25P-201ENST00000410569 230 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RAB28P1-201ENST00000411517 641 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC009237.10-201ENST00000414112 510 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL161631.1-201ENST00000417933 486 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 Z74021.1-201ENST00000423610 407 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RPL23AP25-201ENST00000430973 463 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 PHBP16-201ENST00000446318 950 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC020550.1-201ENST00000447385 163 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 SNRPFP3-201ENST00000457792 225 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 snoU13.4-201ENST00000458916 104 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC011276.1-201ENST00000469688 323 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC022795.1-201ENST00000473808 480 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL049874.1-201ENST00000489560 388 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC010486.1-201ENST00000511793 424 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-123P-201ENST00000516163 102 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.22□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms