Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 SSXP4-201ENST00000451349 245 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 SNRPGP9-201ENST00000456025 225 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 OR6K1P-201ENST00000456766 971 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC024589.1-201ENST00000512207 263 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AF131216.2-201ENST00000512316 564 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 APOOP4-201ENST00000513530 597 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 OR4P1P-201ENST00000530808 1136 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AP004247.1-201ENST00000531556 1289 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC106785.1-201ENST00000565935 262 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC093227.2-201ENST00000589357 285 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC073544.2-201ENST00000601155 540 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC080013.4-201ENST00000607624 649 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC092354.2-201ENST00000607786 514 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC006329.2-201ENST00000611491 394 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL445264.1-201ENST00000621719 171 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL356473.1-201ENST00000406203 1408 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
NDE1Q9NXR1 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NDE1Q9NXR1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NDE1Q9NXR1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.15□□□□□ -1.9
NDE1Q9NXR1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 SPRR2C-201ENST00000290702 219 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AL121657.1-201ENST00000327215 531 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RNU6-28P-201ENST00000362378 107 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 SNORA7.2-201ENST00000364446 145 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RNU6-744P-201ENST00000365557 107 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RNU6-761P-201ENST00000384148 107 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RNU6-878P-201ENST00000384578 110 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 MORF4L1P6-201ENST00000418771 268 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AL512649.1-201ENST00000428997 581 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RSU1P2-202ENST00000437884 485 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 MTCO1P19-201ENST00000443487 500 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 GDI2P2-201ENST00000445131 608 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 HSFY6P-201ENST00000445573 403 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RPS20P24-201ENST00000457473 361 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC116347.2-201ENST00000514912 523 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC022447.1-201ENST00000515358 464 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 OR6C73P-201ENST00000546432 358 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC012065.4-201ENST00000602445 679 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC010591.1-201ENST00000603941 649 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 BCRP9-201ENST00000605312 388 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC027807.2-201ENST00000616099 408 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AL136164.4-201ENST00000625013 2135 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 API5P2-201ENST00000397055 1498 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.91
NDE1Q9NXR1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NDE1Q9NXR1 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
NDE1Q9NXR1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.14□□□□□ -1.91
NDE1Q9NXR1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms