Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RNA5SP505-201ENST00000364748 108 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 SMIM11P1-201ENST00000369586 178 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 SNORA32.2-201ENST00000384049 122 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 SDHCP2-201ENST00000398565 501 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AL592291.1-201ENST00000403830 352 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 MTCO3P46-201ENST00000425787 232 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC008850.1-201ENST00000427546 362 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 MTATP6P4-201ENST00000427725 675 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 NEFMP1-201ENST00000443423 1006 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AL118520.1-201ENST00000450770 291 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RPL21P8-201ENST00000465083 535 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RN7SL738P-201ENST00000470264 297 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RNU6-677P-201ENST00000516914 101 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RN7SKP92-201ENST00000517266 244 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC008489.1-201ENST00000524271 483 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC005668.1-201ENST00000571142 476 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 FAM60BP-201ENST00000578364 658 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 MIR4330-201ENST00000579077 105 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 BDH2P1-201ENST00000602288 736 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC104763.2-201ENST00000604179 382 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RNU6-89P-201ENST00000606519 100 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AC090617.10-201ENST00000624308 134 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 AL359697.1-201ENST00000624879 587 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 TPTE2P4-201ENST00000258589 1605 ntBASIC4.57□□□□□ -1.68
TRIM39Q9HCM9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC009812.4-201ENST00000569134 1805 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RNU6-1279P-201ENST00000383917 103 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RNU6-190P-201ENST00000384154 102 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 NCOR1P3-201ENST00000420479 303 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RPL7P46-201ENST00000425129 740 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 MTCO1P39-201ENST00000426148 480 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 HMGB1P27-201ENST00000431429 603 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 ISCUP1-201ENST00000454451 448 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RNU6-953P-201ENST00000459154 107 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RNU7-180P-201ENST00000459240 63 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC010285.1-201ENST00000470580 392 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 RNU6-1314P-201ENST00000517139 104 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 BTF3P12-201ENST00000519620 469 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 PSMA2P1-201ENST00000526365 646 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AL137161.1-201ENST00000532231 390 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC069061.3-201ENST00000582254 823 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 uc_338.5-201ENST00000611839 155 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 uc_338.18-201ENST00000615451 175 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AC009248.2-201ENST00000619826 254 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AL023881.1-201ENST00000621088 301 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AP000346.3-201ENST00000622821 210 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 AL133243.3-201ENST00000617415 3004 ntBASIC4.56□□□□□ -1.68
TRIM39Q9HCM9 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 AC021146.4-201ENST00000309229 279 ntBASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 RNU1-83P-201ENST00000363426 164 ntBASIC4.55□□□□□ -1.68
TRIM39Q9HCM9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms