Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RPL35AP21-201ENST00000437667 333 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC099670.1-201ENST00000455141 783 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 HSPE1P6-201ENST00000479457 291 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC103975.1-201ENST00000482506 483 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RN7SL271P-201ENST00000487601 295 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RPS4XP23-201ENST00000487801 237 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RPL36AP21-201ENST00000490372 323 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 ENPP7P11-201ENST00000505915 627 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RNA5SP290-201ENST00000517133 127 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF39Q9H2S5 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.4□□□□□ -1.23
RNF39Q9H2S5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC7.4□□□□□ -1.23
RNF39Q9H2S5 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF39Q9H2S5 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 AC018630.2-201ENST00000534866 2403 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 SNURFL-201ENST00000309296 343 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 RNA5SP85-201ENST00000365378 119 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 SNORA40.18-201ENST00000391200 128 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 RN7SKP151-201ENST00000410230 316 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 RNU6-733P-201ENST00000410759 104 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 AC093663.1-201ENST00000497190 394 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 AC009163.5-201ENST00000575421 637 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 CTAGE11P-201ENST00000451540 2353 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 HYDIN2-203ENST00000614586 13885 ntBASIC7.39□□□□□ -1.23
RNF39Q9H2S5 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF39Q9H2S5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 AC008163.1-202ENST00000636004 2889 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 SNORD114-7-201ENST00000362520 77 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 RNU6-457P-201ENST00000363999 107 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 Y_RNA.486-201ENST00000384398 107 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 RNA5SP474-201ENST00000391234 90 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 AC091390.3-201ENST00000426478 338 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 AC098818.1-201ENST00000478593 252 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 RN7SL741P-201ENST00000482473 289 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 RN7SL187P-201ENST00000495587 303 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 RNU7-6P-201ENST00000516845 62 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 Y_RNA.788-201ENST00000622394 112 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 U6.99-201ENST00000637524 83 ntBASIC7.38□□□□□ -1.23
RNF39Q9H2S5 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RNF39Q9H2S5 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 Y_RNA.124-201ENST00000363339 93 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 RNA5SP140-201ENST00000364524 92 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 Y_RNA.467-201ENST00000384297 102 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 U8.17-201ENST00000391292 132 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 DEFA11P-201ENST00000446470 261 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 AL133244.1-201ENST00000456007 258 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 RN7SL393P-201ENST00000463588 296 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 SNRPCP6-201ENST00000528310 210 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 AC022523.2-201ENST00000561045 150 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 RPL23AP91-201ENST00000569211 455 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 AL162713.1-201ENST00000604480 262 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 AL110115.1-201ENST00000614396 364 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 AC004241.2-201ENST00000614562 444 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC7.37□□□□□ -1.23
RNF39Q9H2S5 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RNF39Q9H2S5 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RNF39Q9H2S5 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms