Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 NLRP12-204ENST00000391773 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 EGF-206ENST00000509793 4489 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNA5SP378-201ENST00000363646 120 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-884P-201ENST00000363889 107 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNA5SP435-201ENST00000364044 108 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SKP280-201ENST00000364196 304 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SNORA70.2-201ENST00000364506 135 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNY1P13-201ENST00000365030 105 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SNORA1.2-201ENST00000365189 134 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SNORA24-201ENST00000384096 131 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-729P-201ENST00000384399 107 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-950P-201ENST00000384651 107 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ARSFP1-201ENST00000398758 477 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SKP110-201ENST00000410146 285 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-1052P-201ENST00000411398 104 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SEM1-204ENST00000417009 350 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC012354.2-201ENST00000423051 461 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC134879.1-201ENST00000426062 394 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 HMGN1P33-201ENST00000432945 451 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL161626.1-201ENST00000441480 490 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC005020.1-201ENST00000455459 526 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SL251P-201ENST00000464175 297 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RN7SL370P-201ENST00000470869 295 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 PPIAP15-201ENST00000479662 484 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC091167.1-201ENST00000492017 396 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AL592156.1-201ENST00000508758 304 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC016559.1-201ENST00000511420 199 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR449C-201ENST00000516047 92 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-719P-201ENST00000516671 104 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU7-128P-201ENST00000517247 62 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 IGLV1-41-201ENST00000519790 406 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 IGHV1OR15-3-201ENST00000564926 351 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC022655.2-201ENST00000577280 318 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC093826.2-201ENST00000579042 108 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR4491-201ENST00000581087 68 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RPL23AP77-201ENST00000588044 463 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC024220.1-201ENST00000603675 484 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RPS28P1-201ENST00000604589 187 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RNU6-84P-201ENST00000607737 102 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 FAM25E-202ENST00000608562 189 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR6729-201ENST00000618194 65 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR8065-201ENST00000620577 100 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC025279.3-201ENST00000622398 104 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 MIR1910-201ENST00000636955 80 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ADGRG5-201ENST00000340339 3767 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RASSF4-201ENST00000340258 3641 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 CPSF1P1-201ENST00000397477 3730 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 PAQR5-202ENST00000395407 5337 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SERPINA1-207ENST00000440909 3144 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC023245.2-201ENST00000530760 2978 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC006058.1-201ENST00000568686 5067 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 AC034111.1-201ENST00000562143 3770 ntBASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KRTAP4-11Q9BYQ6 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms