Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR1302-10-201ENST00000408734 138 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 USP9YP20-201ENST00000419224 558 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MTCO2P5-201ENST00000422621 426 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC007283.2-201ENST00000424739 197 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MTCO3P46-201ENST00000425787 232 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC096632.1-201ENST00000427395 310 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 USP9YP15-201ENST00000442391 422 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AP1S2P1-201ENST00000457344 379 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 PABPC1P3-201ENST00000469174 459 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 RPS3AP50-201ENST00000487064 803 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC005726.1-201ENST00000494679 427 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 RNU6-277P-201ENST00000516272 106 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC026403.1-201ENST00000518938 295 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC105029.1-201ENST00000520250 669 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 LSM6P2-201ENST00000552208 177 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AL442663.2-201ENST00000554385 511 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 UBE2L4-201ENST00000587688 464 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MIR1302-2-201ENST00000607096 138 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 MIR6868-201ENST00000611215 58 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC233309.1-201ENST00000619522 751 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AL357559.1-201ENST00000622228 274 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AL160413.1-201ENST00000622780 310 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC005858.4-201ENST00000623191 700 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC009313.2-201ENST00000417893 1941 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 AC130650.2-201ENST00000618736 2403 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 ZNF285B-201ENST00000561698 1767 ntBASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SLC44A3Q8N4M1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SLC44A3Q8N4M1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.21□□□□□ -1.73
SLC44A3Q8N4M1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RPL7P26-201ENST00000333817 754 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 Y_RNA.326-201ENST00000365176 113 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RNU1-44P-201ENST00000384453 163 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-1148P-201ENST00000410992 104 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AF228730.4-201ENST00000421457 183 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 HSPE1P28-201ENST00000443139 211 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RPS3AP12-201ENST00000443616 753 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 CBWD4P-201ENST00000445695 655 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC104073.1-201ENST00000451988 151 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 CACYBPP2-201ENST00000453625 678 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 MTCO2P29-201ENST00000465212 189 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RPS20P21-201ENST00000466859 343 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RNU1-95P-201ENST00000516357 160 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 RNU1-128P-201ENST00000516704 160 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AP005639.2-201ENST00000527592 928 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 CYCSP30-201ENST00000546447 172 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 HMGB3P26-201ENST00000560051 582 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC110743.1-201ENST00000584870 478 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC121334.2-201ENST00000605387 271 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AC021646.1-201ENST00000605469 484 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 FP236240.3-201ENST00000623061 327 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 AL034408.1-202ENST00000636088 415 ntBASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SLC44A3Q8N4M1 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC011155.1-201ENST00000316512 456 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AL161781.1-201ENST00000354277 403 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 SNORA60-201ENST00000362396 134 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 SNORA63-201ENST00000363450 132 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-74P-201ENST00000384235 107 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 MIR1179-201ENST00000408703 91 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 RNU6-373P-201ENST00000411247 98 ntBASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A3Q8N4M1 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms