Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 SLC25A15P5-201ENST00000508033 253 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC093281.2-201ENST00000510153 597 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC026436.1-201ENST00000510537 270 ntBASIC1.35□□□□□ -2.19
RPS28P62857 APOBEC3AP1-201ENST00000511396 287 ntBASIC1.35□□□□□ -2.19
RPS28P62857 RNA5SP137-201ENST00000516833 135 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS28P62857 AC107953.1-201ENST00000522216 297 ntBASIC1.35□□□□□ -2.19
RPS28P62857 TOMM20P1-201ENST00000534518 427 ntBASIC1.35□□□□□ -2.19
RPS28P62857 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
RPS28P62857 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 MIR4765-201ENST00000585007 77 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC006116.5-201ENST00000591936 559 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AL078605.1-201ENST00000603529 500 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AC022387.2-201ENST00000604050 448 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AL138963.2-201ENST00000605137 226 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS28P62857 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS28P62857 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS28P62857 AC007998.5-201ENST00000622938 237 ntBASIC1.35□□□□□ -2.19
RPS28P62857 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS28P62857 MTCO1P23-201ENST00000415223 1526 ntBASIC1.35□□□□□ -2.19
RPS28P62857 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RPS28P62857 RNU1-72P-201ENST00000362976 153 ntBASIC1.34□□□□□ -2.19
RPS28P62857 RNU6-76P-201ENST00000384060 104 ntBASIC1.34□□□□□ -2.19
RPS28P62857 RPL7P60-201ENST00000397636 735 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AL589655.1-201ENST00000405398 482 ntBASIC1.34□□□□□ -2.19
RPS28P62857 U6atac.2-201ENST00000408644 118 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.34□□□□□ -2.19
RPS28P62857 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.34□□□□□ -2.19
RPS28P62857 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.34□□□□□ -2.19
RPS28P62857 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC1.34□□□□□ -2.19
RPS28P62857 AL139247.1-201ENST00000422768 325 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC018630.2-202ENST00000422992 927 ntBASIC1.34□□□□□ -2.19
RPS28P62857 RPL23AP38-201ENST00000423801 469 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC019097.1-201ENST00000424783 735 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC1.34□□□□□ -2.19
RPS28P62857 AC005300.1-201ENST00000428401 373 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC007919.1-201ENST00000429380 217 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC1.34□□□□□ -2.19
RPS28P62857 AL035246.1-201ENST00000433554 1255 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.34□□□□□ -2.19
RPS28P62857 AC011816.1-201ENST00000441346 546 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC009238.1-201ENST00000442165 424 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC009237.6-201ENST00000446969 424 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.34□□□□□ -2.19
RPS28P62857 MTND2P28-201ENST00000457540 1044 ntBASIC1.34□□□□□ -2.19
RPS28P62857 RPS4XP10-201ENST00000465034 731 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC027575.1-201ENST00000481064 460 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC140059.1-201ENST00000489238 361 ntBASIC1.34□□□□□ -2.19
RPS28P62857 HMGB1P35-201ENST00000503360 598 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC1.34□□□□□ -2.19
RPS28P62857 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RPS28P62857 RNA5SP282-201ENST00000516355 108 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.34□□□□□ -2.19
RPS28P62857 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.34□□□□□ -2.19
RPS28P62857 AC008127.2-201ENST00000549925 1075 ntBASIC1.34□□□□□ -2.19
RPS28P62857 PCNPP1-201ENST00000552501 511 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC027176.1-201ENST00000560204 514 ntBASIC1.34□□□□□ -2.19
RPS28P62857 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC1.34□□□□□ -2.19
RPS28P62857 LRRC37A5P-203ENST00000580181 585 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC024619.4-201ENST00000580924 316 ntBASIC1.34□□□□□ -2.19
RPS28P62857 MIR4635-201ENST00000583759 79 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC005242.1-201ENST00000585658 438 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC022001.1-201ENST00000605193 268 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC003001.2-201ENST00000616294 831 ntBASIC1.34□□□□□ -2.19
RPS28P62857 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RPS28P62857 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RPS28P62857 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC1.34□□□□□ -2.19
RPS28P62857 AC116618.1-201ENST00000634617 774 ntBASIC1.34□□□□□ -2.19
RPS28P62857 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
RPS28P62857 AC069528.2-201ENST00000624849 1991 ntBASIC1.34□□□□□ -2.2
RPS28P62857 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.2
RPS28P62857 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RPS28P62857 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RPS28P62857 RNU6-884P-201ENST00000363889 107 ntBASIC1.33□□□□□ -2.2
RPS28P62857 RNU6-878P-201ENST00000384578 110 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AC007742.1-201ENST00000425789 329 ntBASIC1.33□□□□□ -2.2
RPS28P62857 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RPS28P62857 ELOCP26-201ENST00000436067 329 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.33□□□□□ -2.2
RPS28P62857 MTCO1P48-201ENST00000448024 1096 ntBASIC1.33□□□□□ -2.2
RPS28P62857 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC1.33□□□□□ -2.2
RPS28P62857 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC1.33□□□□□ -2.2
RPS28P62857 snoU13.1-201ENST00000459157 104 ntBASIC1.33□□□□□ -2.2
RPS28P62857 RN7SL717P-201ENST00000478343 297 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 CKS1BP2-201ENST00000497342 240 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC1.33□□□□□ -2.2
RPS28P62857 RN7SKP70-201ENST00000516655 271 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.33□□□□□ -2.2
RPS28P62857 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC1.33□□□□□ -2.2
RPS28P62857 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.33□□□□□ -2.2
RPS28P62857 AP003066.2-201ENST00000529375 555 ntBASIC1.33□□□□□ -2.2
RPS28P62857 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms