Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.5□□□□□ -1.85
LIMK1P53667 AC072039.2-201ENST00000608883 439 ntBASIC3.5□□□□□ -1.85
LIMK1P53667 AC107294.1-201ENST00000609524 467 ntBASIC3.5□□□□□ -1.85
LIMK1P53667 RNVU1-4-201ENST00000612985 164 ntBASIC3.5□□□□□ -1.85
LIMK1P53667 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
LIMK1P53667 AC131159.1-201ENST00000621854 213 ntBASIC3.5□□□□□ -1.85
LIMK1P53667 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.5□□□□□ -1.85
LIMK1P53667 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIMK1P53667 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.5□□□□□ -1.85
LIMK1P53667 AC087359.1-201ENST00000508335 1740 ntBASIC3.5□□□□□ -1.85
LIMK1P53667 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LIMK1P53667 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LIMK1P53667 AC011477.1-204ENST00000623416 1325 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-1155P-201ENST00000363554 107 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-777P-201ENST00000364265 104 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-7-201ENST00000364784 107 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-8-201ENST00000365467 107 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-744P-201ENST00000365557 107 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-1316P-201ENST00000384242 108 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 MIR184-201ENST00000384962 84 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LIMK1P53667 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK1P53667 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.49□□□□□ -1.85
LIMK1P53667 CCDC58P2-201ENST00000417131 366 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 MTND1P20-201ENST00000430341 950 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 AC098824.1-201ENST00000453565 980 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 ATG12P2-201ENST00000456830 416 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC091179.1-201ENST00000461606 579 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RPL23AP14-201ENST00000468281 468 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC072039.1-201ENST00000477611 581 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 RPL30P14-201ENST00000482744 348 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK1P53667 RNU6-678P-201ENST00000516832 109 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK1P53667 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 SUMO2P20-201ENST00000520803 283 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK1P53667 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.49□□□□□ -1.85
LIMK1P53667 ISCA1P3-201ENST00000577104 373 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 MIR4425-201ENST00000580572 84 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK1P53667 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.49□□□□□ -1.85
LIMK1P53667 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK1P53667 NIFKP6-201ENST00000598115 845 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 BNIP3P23-201ENST00000599655 511 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AL450489.1-201ENST00000612071 468 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK1P53667 AL592295.2-201ENST00000612578 206 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 AC079684.1-201ENST00000621405 437 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK1P53667 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LIMK1P53667 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK1P53667 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
LIMK1P53667 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK1P53667 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.49□□□□□ -1.85
LIMK1P53667 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LIMK1P53667 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK1P53667 AL513185.3-201ENST00000433335 1300 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK1P53667 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK1P53667 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LIMK1P53667 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK1P53667 FRG1BP-201ENST00000278882 761 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.48□□□□□ -1.85
LIMK1P53667 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LIMK1P53667 RPS4XP3-201ENST00000398541 413 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 MTND4P13-201ENST00000402078 1023 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 RNA5SP38-201ENST00000410750 119 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 MTCO1P17-201ENST00000411522 491 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 RAP1BP1-201ENST00000412709 553 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 HMGB1P11-201ENST00000413899 637 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 SSXP9-201ENST00000417503 292 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK1P53667 AC011233.1-201ENST00000422812 283 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 MTCO1P39-201ENST00000426148 480 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.48□□□□□ -1.85
LIMK1P53667 TRIM60P18-201ENST00000441518 828 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 OR6K5P-201ENST00000447050 945 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AL590664.1-201ENST00000448065 339 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 RPL30P9-201ENST00000465586 330 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 HMGB1P36-201ENST00000487709 576 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 TRBV12-2-201ENST00000489763 344 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.48□□□□□ -1.85
LIMK1P53667 VN1R104P-201ENST00000505115 1009 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC110794.1-201ENST00000505816 425 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.48□□□□□ -1.85
LIMK1P53667 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
LIMK1P53667 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 SNORA70.18-201ENST00000516696 98 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 RN7SKP209-201ENST00000516888 304 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.48□□□□□ -1.85
LIMK1P53667 OR5AP1P-201ENST00000529730 940 ntBASIC3.48□□□□□ -1.85
LIMK1P53667 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms