Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 RNU4-76P-201ENST00000364509 141 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 RNU6-516P-201ENST00000411381 104 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 PDCL2P1-201ENST00000419302 352 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN7P35236 AC005094.1-201ENST00000440420 368 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 RPL23AP33-201ENST00000442301 452 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC093019.1-201ENST00000443135 252 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 CBWD4P-201ENST00000445695 655 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 RPL29P29-201ENST00000448725 423 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN7P35236 snoU13.3-201ENST00000459441 104 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC126389.1-201ENST00000477436 290 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 EIF4EP3-201ENST00000498782 656 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 RPL38P4-201ENST00000502376 214 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPN7P35236 AC105417.1-201ENST00000514691 285 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 HMGB1P41-201ENST00000520234 440 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC103843.2-201ENST00000530523 682 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AP001029.3-201ENST00000588063 596 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 AL121757.2-201ENST00000611223 313 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC093838.1-201ENST00000613014 469 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 AC099654.10-201ENST00000640395 161 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 AC012618.3-205ENST00000637896 1496 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.29□□□□□ -1.72
PTPN7P35236 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PTPN7P35236 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.29□□□□□ -1.72
PTPN7P35236 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PTPN7P35236 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PTPN7P35236 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN7P35236 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 Y_RNA.142-201ENST00000363491 102 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 RNA5SP447-201ENST00000363749 119 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 RNU1-132P-201ENST00000364300 164 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 RNA5SP513-201ENST00000364648 118 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN7P35236 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN7P35236 RNU2-36P-201ENST00000410361 191 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AL391219.1-201ENST00000422570 483 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 MTCYBP8-201ENST00000422855 651 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AL772161.1-201ENST00000439130 476 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN7P35236 HMGB3P22-202ENST00000451823 572 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN7P35236 RN7SL271P-201ENST00000487601 295 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC093278.1-201ENST00000494700 600 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 RPL31P61-201ENST00000496160 376 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 NIPA2P2-201ENST00000496376 1083 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC099522.1-202ENST00000514718 367 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 RNU7-51P-201ENST00000516560 62 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 RNU7-143P-201ENST00000516781 65 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN7P35236 PSMA2P1-201ENST00000526365 646 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN7P35236 DEFB108D-201ENST00000527787 222 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN7P35236 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC022655.2-201ENST00000577280 318 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 MIR4775-201ENST00000581168 75 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.28□□□□□ -1.72
PTPN7P35236 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 MIR7151-201ENST00000617477 60 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.28□□□□□ -1.72
PTPN7P35236 AL773545.4-201ENST00000637262 310 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 AC112487.2-201ENST00000637950 304 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN7P35236 AL513478.4-201ENST00000641636 310 ntBASIC4.28□□□□□ -1.72
PTPN7P35236 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN7P35236 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
PTPN7P35236 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN7P35236 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPN7P35236 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PTPN7P35236 AC004972.1-201ENST00000623934 2209 ntBASIC4.27□□□□□ -1.73
PTPN7P35236 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN7P35236 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN7P35236 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPN7P35236 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPN7P35236 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms