Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 SNORA11.3-201ENST00000408471 128 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC245884.2-201ENST00000426257 404 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 RPS5P7-201ENST00000456664 608 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 snoU109.4-201ENST00000458953 143 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC022493.1-201ENST00000492984 337 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 RNU6-567P-201ENST00000516746 107 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 TRAV37-201ENST00000553906 342 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 SNORA11.6-201ENST00000619030 128 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 U4.7-201ENST00000638126 106 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AL079305.1-201ENST00000623159 3008 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 ZNF204P-201ENST00000416749 2397 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 AC109446.4-201ENST00000623235 2755 ntBASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VPS9D1Q9Y2B5 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC018628.1-201ENST00000624147 3819 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC092593.1-201ENST00000515413 1815 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 RNU6-17P-201ENST00000384245 107 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 RNU6-18P-201ENST00000384527 107 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 RNU2-22P-201ENST00000411266 212 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC099782.1-201ENST00000425889 474 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AL354707.3-201ENST00000427308 331 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 Z82210.1-201ENST00000440037 231 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 RPS20P10-201ENST00000451209 253 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 TEX41-209ENST00000451478 452 ntTSL 2 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC023141.9-201ENST00000458734 412 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC090049.2-201ENST00000550377 109 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 OR4H12P-201ENST00000556269 907 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC119403.2-201ENST00000590960 598 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC005046.1-201ENST00000608515 625 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 RN7SL261P-201ENST00000613441 282 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AC068831.7-201ENST00000616954 363 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 MIR6864-201ENST00000617935 70 ntBASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
VPS9D1Q9Y2B5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
VPS9D1Q9Y2B5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
VPS9D1Q9Y2B5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC6.09□□□□□ -1.44
VPS9D1Q9Y2B5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
VPS9D1Q9Y2B5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 RNU105B-201ENST00000364478 208 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 RNU6-741P-201ENST00000383889 107 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 Y_RNA.525-201ENST00000384570 113 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AP000907.1-201ENST00000428428 510 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AL358472.1-201ENST00000431295 329 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 MTCO1P44-201ENST00000441935 243 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 AP006222.1-205ENST00000450734 457 ntBASIC6.08□□□□□ -1.44
VPS9D1Q9Y2B5 RPL23AP45-201ENST00000476406 468 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms