Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AP000676.3-201ENST00000623299 569 ntBASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 AC019226.1-201ENST00000625666 515 ntBASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 MIR492-201ENST00000638676 116 ntBASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.31□□□□□ -1.88
CHCHD3Q9NX63 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RPL32P3-201ENST00000359025 275 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RNU6-433P-201ENST00000363216 104 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RNU1-109P-201ENST00000383960 147 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 Y_RNA.548-201ENST00000384656 105 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 MIR514A1-201ENST00000385133 98 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 U3.22-201ENST00000391120 215 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 SOD2P1-201ENST00000396543 562 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RNA5SP38-201ENST00000410750 119 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AL359704.1-201ENST00000411586 781 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 HMGN1P24-201ENST00000412282 298 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 HMGB1P11-201ENST00000413899 637 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC018630.2-202ENST00000422992 927 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC008850.1-201ENST00000427546 362 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 TBCAP1-201ENST00000436520 327 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RPL39P40-201ENST00000445481 146 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 UBBP3-201ENST00000445497 241 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RPS29P12-201ENST00000460178 152 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC091564.1-201ENST00000464563 479 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 LINC00888-204ENST00000487386 421 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC026979.1-201ENST00000492525 396 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 CDC42P4-201ENST00000510507 563 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 TRMT10BP1-201ENST00000519377 943 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AP001004.1-201ENST00000582468 324 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 MIR3939-201ENST00000582614 106 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC093227.2-201ENST00000589357 285 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 BNIP3P23-201ENST00000599655 511 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 RNU4-89P-201ENST00000607443 133 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC069234.5-201ENST00000611056 416 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AL359198.2-201ENST00000611836 194 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AL031667.3-201ENST00000620124 655 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC091965.5-201ENST00000624785 342 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC008993.2-201ENST00000631744 806 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC119674.1-207ENST00000641355 633 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC093831.2-201ENST00000624393 3427 ntBASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHCHD3Q9NX63 AC006378.2-201ENST00000623178 2476 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 RNU6-769P-201ENST00000384407 104 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL109755.1-201ENST00000401791 649 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 MTND4P13-201ENST00000402078 1023 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL022722.2-201ENST00000402519 180 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL357075.1-201ENST00000404107 726 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC007899.1-201ENST00000412776 775 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 Z74696.2-201ENST00000436514 498 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 FAM103A2P-201ENST00000444122 354 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 HSFY6P-201ENST00000445573 403 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL162389.1-201ENST00000449233 177 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 RPS7P7-201ENST00000463499 571 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 MTND1P22-201ENST00000510572 951 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 GMPSP1-201ENST00000514075 579 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 RNU6-840P-201ENST00000517275 65 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 ELOCP32-201ENST00000548625 324 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC009094.1-201ENST00000564443 426 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AC060771.1-201ENST00000582031 164 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AL031985.2-201ENST00000600955 480 ntBASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.29□□□□□ -1.88
CHCHD3Q9NX63 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms