Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 THAP5P1-201ENST00000439089 262 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AL606662.1-201ENST00000445763 553 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 LINC00888-204ENST00000487386 421 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 OR7K1P-201ENST00000546439 926 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AC034105.3-201ENST00000565294 442 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 BNIP3P23-201ENST00000599655 511 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AL020991.1-201ENST00000612314 373 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 MIR6798-201ENST00000612887 67 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 AC009464.1-201ENST00000615731 469 ntBASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VIPAS39Q9H9C1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
VIPAS39Q9H9C1 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-853P-201ENST00000364306 107 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-882P-201ENST00000391025 103 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 RPS3AP26-201ENST00000398259 784 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 HSFY4P-201ENST00000415994 1181 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 YPEL5P1-201ENST00000419731 367 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC004975.1-201ENST00000428733 208 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC108734.1-201ENST00000439549 399 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 MTND5P2-201ENST00000442927 1142 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 MTCYBP3-201ENST00000445588 1137 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 OR6K5P-201ENST00000447050 945 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC234775.1-201ENST00000454247 670 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC104563.1-201ENST00000476147 376 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC072039.1-201ENST00000477611 581 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 RN7SL297P-201ENST00000483161 293 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC068587.1-201ENST00000483613 781 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 HMGN1P11-201ENST00000508668 303 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 SNORA31.26-201ENST00000517250 137 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC012435.1-202ENST00000568772 240 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC106791.2-201ENST00000604680 391 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC018714.1-201ENST00000605028 208 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AL031667.3-201ENST00000620124 655 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 AC010338.1-201ENST00000621823 717 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VIPAS39Q9H9C1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-660P-201ENST00000364566 109 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 RN7SKP263-201ENST00000411194 309 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 SSXP4-201ENST00000451349 245 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL590639.1-201ENST00000456484 337 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 RPS27AP9-201ENST00000477681 438 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 SNORA31.8-201ENST00000516327 108 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-528P-201ENST00000516926 100 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC013828.2-201ENST00000532487 235 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC125611.2-201ENST00000551907 647 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 MIR5685-201ENST00000579080 79 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AL353997.4-201ENST00000586196 166 ntBASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.14□□□□□ -1.91
VIPAS39Q9H9C1 VN1R92P-201ENST00000598511 928 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms