Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CDKN2B-AS1-203ENST00000428597 3835 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC021146.4-201ENST00000309229 279 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 IDSP1-201ENST00000324799 376 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RNA5SP301-201ENST00000362537 121 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA22.1-201ENST00000362701 134 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORD115-2-201ENST00000362842 82 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-335P-201ENST00000364563 113 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-302P-201ENST00000365249 107 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CD46-209ENST00000367047 3089 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SELE-203ENST00000367775 3389 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CST9LP1-201ENST00000376987 444 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-1162P-201ENST00000384443 104 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 MIR614-201ENST00000385082 90 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA35-201ENST00000386104 128 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 Z98745.1-201ENST00000402553 494 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SKP154-201ENST00000410136 290 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SNORA73.3-201ENST00000410213 189 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 FAR2P2-201ENST00000413041 594 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL356095.1-201ENST00000417217 199 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC109638.1-201ENST00000417406 326 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC111200.2-201ENST00000418877 505 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TIMM8AP1-201ENST00000419283 295 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 OR2AM1P-201ENST00000422137 422 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC063976.3-201ENST00000426849 329 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 Z98752.2-201ENST00000432727 312 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC099344.1-201ENST00000433548 492 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 SNRPGP14-201ENST00000435400 219 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL031681.1-201ENST00000443304 400 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC245102.2-201ENST00000448956 180 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AL135929.1-201ENST00000449287 552 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 OR52I1-201ENST00000450052 1050 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RBMY2UP-201ENST00000453474 324 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 TXNP3-201ENST00000454560 301 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AP000705.1-201ENST00000454567 350 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 PTPRE-207ENST00000471218 522 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL403P-201ENST00000481783 305 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL31P13-201ENST00000484151 370 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RN7SL272P-201ENST00000487762 289 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC244505.1-201ENST00000502642 307 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AC109481.1-201ENST00000509173 282 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 MRPS17P9-201ENST00000511924 393 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU6-998P-201ENST00000515894 101 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RNU7-2P-201ENST00000516096 62 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 COX6B1P6-201ENST00000522347 255 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 IGKV2D-14-201ENST00000522473 355 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RPL10P9-201ENST00000522551 645 ntBASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
KRTAP4-4Q9BYR3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms