Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC010469.1-201ENST00000463864 576 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 MED28P2-201ENST00000475771 317 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 RN7SL727P-201ENST00000482164 296 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 CEACAMP10-202ENST00000495431 496 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AC025445.1-201ENST00000502728 300 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 SUMO2P4-201ENST00000504193 276 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AC092436.1-201ENST00000506450 503 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AP001804.2-201ENST00000533932 910 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.13□□□□□ -1.75
HMGA2P52926 AC007225.2-201ENST00000562529 256 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 MIR4433B-201ENST00000581329 102 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.13□□□□□ -1.75
HMGA2P52926 AL355297.3-201ENST00000604082 446 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AC243773.3-201ENST00000613270 256 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AC011890.2-201ENST00000613393 294 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 AC127459.3-201ENST00000624328 466 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 U3.53-201ENST00000628922 216 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA2P52926 AC011978.2-201ENST00000569835 2054 ntBASIC4.13□□□□□ -1.75
HMGA2P52926 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA2P52926 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA2P52926 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA2P52926 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HMGA2P52926 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
HMGA2P52926 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA2P52926 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGA2P52926 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA2P52926 AC007342.5-201ENST00000571340 2142 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HMGA2P52926 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGA2P52926 RNA5SP123-201ENST00000363244 119 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 RNU6-343P-201ENST00000364709 104 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 Y_RNA.274-201ENST00000364714 101 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 RNU6-740P-201ENST00000364734 105 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 Y_RNA.493-201ENST00000384422 102 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
HMGA2P52926 UBE2V1P2-201ENST00000397758 440 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.12□□□□□ -1.75
HMGA2P52926 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA2P52926 AC016831.4-201ENST00000438302 307 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGA2P52926 AC012671.1-201ENST00000451912 203 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGA2P52926 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA2P52926 AL049714.1-201ENST00000466686 347 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 RPL7L1P8-201ENST00000469911 741 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGA2P52926 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGA2P52926 SNORD27.1-201ENST00000516319 72 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 RNU4-77P-201ENST00000516692 156 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 RNU6-1212P-201ENST00000517023 104 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 IGLVIV-64-201ENST00000518581 301 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AP003385.6-201ENST00000531603 374 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AP001880.2-201ENST00000538233 448 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC068446.3-201ENST00000555285 382 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGA2P52926 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA2P52926 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA2P52926 MIR5583-1-201ENST00000580941 59 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC010620.2-201ENST00000600135 313 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC011468.4-201ENST00000603942 409 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC009779.6-201ENST00000603972 165 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC007546.2-201ENST00000623996 360 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 AC091925.2-201ENST00000625059 256 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.12□□□□□ -1.75
HMGA2P52926 ZNF137P-201ENST00000456718 1920 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HMGA2P52926 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA2P52926 BTBD10P1-201ENST00000549824 1352 ntBASIC4.12□□□□□ -1.75
HMGA2P52926 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA2P52926 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA2P52926 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
HMGA2P52926 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.12□□□□□ -1.75
HMGA2P52926 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.12□□□□□ -1.75
HMGA2P52926 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGA2P52926 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGA2P52926 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA2P52926 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA2P52926 LINC01109-201ENST00000603837 3081 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA2P52926 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.11□□□□□ -1.75
HMGA2P52926 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA2P52926 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMGA2P52926 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA2P52926 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HMGA2P52926 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HMGA2P52926 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HMGA2P52926 MIR448-201ENST00000362131 111 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 RNU6-552P-201ENST00000362869 119 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 Y_RNA.367-201ENST00000365544 101 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 Y_RNA.464-201ENST00000384282 110 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 MIR506-201ENST00000384998 124 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 NDUFS5P1-201ENST00000405668 289 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 MIR1303-201ENST00000408625 86 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.11□□□□□ -1.75
HMGA2P52926 RNA5SP113-201ENST00000410486 84 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.11□□□□□ -1.75
HMGA2P52926 BX510359.2-201ENST00000417920 305 ntBASIC4.11□□□□□ -1.75
HMGA2P52926 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.11□□□□□ -1.75
HMGA2P52926 AC005154.2-201ENST00000438110 379 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms