Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRP9P49458 CR848007.1-201ENST00000442354 1699 ntBASIC1.97□□□□□ -2.09
SRP9P49458 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRP9P49458 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRP9P49458 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
SRP9P49458 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SRP9P49458 U3.29-201ENST00000391296 212 ntBASIC1.97□□□□□ -2.09
SRP9P49458 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
SRP9P49458 RNA5SP508-201ENST00000411327 119 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP9P49458 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP9P49458 AC009963.1-201ENST00000417265 157 ntBASIC1.97□□□□□ -2.09
SRP9P49458 BOLA3P4-201ENST00000418151 400 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AC007560.1-201ENST00000426912 237 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AC006548.1-201ENST00000427470 102 ntBASIC1.97□□□□□ -2.09
SRP9P49458 RPL7L1P10-201ENST00000427790 463 ntBASIC1.97□□□□□ -2.09
SRP9P49458 RPS15AP28-201ENST00000435088 386 ntBASIC1.97□□□□□ -2.09
SRP9P49458 ARPC3P1-201ENST00000437218 533 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.97□□□□□ -2.09
SRP9P49458 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.97□□□□□ -2.09
SRP9P49458 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
SRP9P49458 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
SRP9P49458 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AP003122.3-201ENST00000526316 255 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP9P49458 AC002984.1-201ENST00000591692 448 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AL355812.1-201ENST00000603215 216 ntBASIC1.97□□□□□ -2.09
SRP9P49458 APOOP1-201ENST00000604695 592 ntBASIC1.97□□□□□ -2.09
SRP9P49458 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.97□□□□□ -2.09
SRP9P49458 CR381572.1-201ENST00000625098 102 ntBASIC1.97□□□□□ -2.09
SRP9P49458 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SRP9P49458 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SRP9P49458 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SRP9P49458 MTND4P1-201ENST00000457501 1466 ntBASIC1.96□□□□□ -2.1
SRP9P49458 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
SRP9P49458 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SRP9P49458 RNU1-91P-201ENST00000364746 163 ntBASIC1.96□□□□□ -2.1
SRP9P49458 SNORA46.1-201ENST00000391069 153 ntBASIC1.96□□□□□ -2.1
SRP9P49458 AL445529.1-201ENST00000398713 389 ntBASIC1.96□□□□□ -2.1
SRP9P49458 DSTNP4-201ENST00000399472 474 ntBASIC1.96□□□□□ -2.1
SRP9P49458 RNU4-53P-201ENST00000410828 140 ntBASIC1.96□□□□□ -2.1
SRP9P49458 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
SRP9P49458 Z93242.1-201ENST00000427102 353 ntBASIC1.96□□□□□ -2.1
SRP9P49458 Z99127.2-201ENST00000441426 334 ntBASIC1.96□□□□□ -2.1
SRP9P49458 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 DNAJC19P8-201ENST00000452887 259 ntBASIC1.96□□□□□ -2.1
SRP9P49458 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP9P49458 PNPLA4P1-201ENST00000458328 305 ntBASIC1.96□□□□□ -2.1
SRP9P49458 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.96□□□□□ -2.1
SRP9P49458 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP9P49458 MTCYBP20-201ENST00000524239 1129 ntBASIC1.96□□□□□ -2.1
SRP9P49458 OR4V1P-201ENST00000525394 1140 ntBASIC1.96□□□□□ -2.1
SRP9P49458 AC118942.1-201ENST00000529674 1035 ntBASIC1.96□□□□□ -2.1
SRP9P49458 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP9P49458 AC024224.1-201ENST00000538284 609 ntBASIC1.96□□□□□ -2.1
SRP9P49458 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.96□□□□□ -2.1
SRP9P49458 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SRP9P49458 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.96□□□□□ -2.1
SRP9P49458 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP9P49458 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP9P49458 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.96□□□□□ -2.1
SRP9P49458 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.96□□□□□ -2.1
SRP9P49458 AC010149.2-201ENST00000637608 315 ntBASIC1.96□□□□□ -2.1
SRP9P49458 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SRP9P49458 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SRP9P49458 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SRP9P49458 KPNA2P1-201ENST00000458289 1591 ntBASIC1.95□□□□□ -2.1
SRP9P49458 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SRP9P49458 SNORA68.1-201ENST00000364537 132 ntBASIC1.95□□□□□ -2.1
SRP9P49458 RNU1-73P-201ENST00000383971 164 ntBASIC1.95□□□□□ -2.1
SRP9P49458 SNORA67.4-201ENST00000384688 142 ntBASIC1.95□□□□□ -2.1
SRP9P49458 U3.20-201ENST00000390909 217 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AL356379.1-201ENST00000414105 126 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
SRP9P49458 ARF4P4-201ENST00000439608 520 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP9P49458 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP9P49458 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP9P49458 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP9P49458 RNA5SP281-201ENST00000516504 135 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.95□□□□□ -2.1
SRP9P49458 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.95□□□□□ -2.1
SRP9P49458 AC090888.1-201ENST00000561335 1141 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AC009063.1-201ENST00000563342 702 ntBASIC1.95□□□□□ -2.1
SRP9P49458 MTCO1P40-201ENST00000574371 625 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AC013562.2-201ENST00000611632 603 ntBASIC1.95□□□□□ -2.1
SRP9P49458 MIR6132-201ENST00000622083 109 ntBASIC1.95□□□□□ -2.1
SRP9P49458 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.95□□□□□ -2.1
SRP9P49458 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.94□□□□□ -2.1
SRP9P49458 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.94□□□□□ -2.1
SRP9P49458 CENPCP1-201ENST00000533085 2578 ntBASIC1.94□□□□□ -2.1
SRP9P49458 AC010680.1-201ENST00000590024 3590 ntBASIC1.94□□□□□ -2.1
SRP9P49458 FAM133CP-201ENST00000332869 704 ntBASIC1.94□□□□□ -2.1
SRP9P49458 RNA5SP289-201ENST00000362332 137 ntBASIC1.94□□□□□ -2.1
SRP9P49458 RNU6-1074P-201ENST00000383995 104 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms